Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G253500.1 | Wheat | nucleus | 94.33 | 93.82 |
| TraesCS3B01G288900.2 | Wheat | plastid | 96.22 | 92.8 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 93.25 | 92.67 |
| Zm00001d028142_P001 | Maize | cytosol | 7.74 | 86.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 7.65 | 85.0 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 90.01 | 84.53 |
| Os01t0706400-01 | Rice | plasma membrane | 62.2 | 62.76 |
| CDY04642 | Canola | cytosol | 7.38 | 54.67 |
| EES03498 | Sorghum | nucleus, plastid | 57.61 | 51.74 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 55.27 | 50.7 |
| TraesCS3B01G296700.1 | Wheat | mitochondrion, plastid | 10.62 | 36.99 |
| TraesCS3B01G498800.1 | Wheat | cytosol | 14.85 | 32.29 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.38 | 31.33 |
| TraesCS5B01G347800.1 | Wheat | mitochondrion | 13.59 | 31.2 |
| TraesCS4B01G219300.1 | Wheat | mitochondrion | 5.04 | 30.43 |
| CDY35879 | Canola | mitochondrion | 22.68 | 27.48 |
| Bra039012.1-P | Field mustard | mitochondrion | 22.68 | 27.48 |
| KRH49036 | Soybean | mitochondrion | 26.01 | 27.45 |
| CDX82713 | Canola | mitochondrion | 22.59 | 27.31 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 22.95 | 27.21 |
| KRH74171 | Soybean | mitochondrion | 25.92 | 27.07 |
| Bra011109.1-P | Field mustard | mitochondrion | 21.33 | 25.76 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 24.66 | 25.25 |
| CDY43502 | Canola | mitochondrion | 21.24 | 25.24 |
| KRH41442 | Soybean | cytosol | 10.08 | 25.11 |
| Solyc07g032230.2.1 | Tomato | nucleus | 24.21 | 25.07 |
| TraesCS4B01G044800.1 | Wheat | mitochondrion | 7.02 | 23.21 |
| TraesCS4B01G219400.1 | Wheat | mitochondrion | 5.49 | 23.11 |
| AT4G29440.1 | Thale cress | mitochondrion | 22.41 | 22.84 |
| TraesCS4B01G045100.1 | Wheat | mitochondrion | 7.2 | 22.66 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 25.02 | 22.33 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 17.73 | 16.71 |
| TraesCS4B01G219200.1 | Wheat | mitochondrion, plastid | 7.92 | 16.24 |
| TraesCS6B01G161300.1 | Wheat | cytosol, nucleus, plastid | 8.82 | 13.74 |
| TraesCS7B01G345200.1 | Wheat | cytosol, nucleus, plastid | 8.01 | 12.24 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G284600.1 | EnsemblPlantsGene:TraesCS3B01G284600 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:-:455676222..455681593
Molecular Weight (calculated)
122791.0 Da
IEP (calculated)
6.313
GRAVY (calculated)
-1.090
Length
1111 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHRSKGKLSG VLSKGFKPDK CKIALKMAMA RIKLLRNKKE VQVCQMRREV AQLLDGNQDQ TARIRVEHVI REEKFMQAYD LIEVYCELIV ARMSIIDSQK
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSQYSGG NIPTSGSSAS NVPTPQPAAA PYSSVQPATS RVPAGPSYES SEAPANRNPH DTANSNASTQ ENRRGSDASV PPSFQHGATT YSSANIPGSN
0301: NYSNTGSSSV SRPHSQFGST VPDSVSRTEE INRPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQDTG SYESTAYMND
0401: TTPRKQQAGR LMKDGKSFNE QSSGINDPRM ISSSTRKNEE AETNRASSKN MSTPYSSQLH SYAPESHTDH DMPTEPHHAH SSEPPYFNDS SEKESNIRRP
0501: EDHPFDLHEE RLPDAGFDWH HTKDIGSRQA SFDQESRNNH YSNFSASHGG SSTSWDNQND KAGADSSAVL FDEYDHDVQE ENLLDHFSSK HTEELPTVQD
0601: HKGFSSADWS QQPRSESPVD HSTSTLFSRT ETQPSYDLGA NKEEDIPLND TRPPTFDSDG VSSDEETSTD MHILRTHSRG SDYSENKMFN KNSGKSVPDV
0701: IEDHESRPSK QYQNPPGSDV FRKEQNSDGS PRYDYSGAQE NLGRLQSRDY DLSEEETEPH KLKGTSSGIT GANENRPSPF RMPTSATSDD SDDGDLGLNY
0801: GRLTPGLRNK LRQGPQYKIS GDNLLRKQSL EGAPASIEES VHFKENDPSS EQMGDTPKGS RATKNSFGAN YHSEHLDGRH TVGKPLESRS SMTRNDFYSG
0901: DTGKLSERSG SPISSPAKTS VRENSIQEPH LERPGSGVRR ESRSRTVRTF FDSDESEEEL ERRRSGRTKL SKEQIQSRRT REVAPDTKRD GRARAGAPYA
1001: VETESMPKSP AKAFSNSSTE QRKAAPAYSR VSVQQSSPNP VRIEPPTARD RWQEDEPEGS SSPENEGNRE TSAETLKVST PTAGPAHVHP KLPTDYDSFA
1101: AHFKSLRTNR R
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSQYSGG NIPTSGSSAS NVPTPQPAAA PYSSVQPATS RVPAGPSYES SEAPANRNPH DTANSNASTQ ENRRGSDASV PPSFQHGATT YSSANIPGSN
0301: NYSNTGSSSV SRPHSQFGST VPDSVSRTEE INRPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQDTG SYESTAYMND
0401: TTPRKQQAGR LMKDGKSFNE QSSGINDPRM ISSSTRKNEE AETNRASSKN MSTPYSSQLH SYAPESHTDH DMPTEPHHAH SSEPPYFNDS SEKESNIRRP
0501: EDHPFDLHEE RLPDAGFDWH HTKDIGSRQA SFDQESRNNH YSNFSASHGG SSTSWDNQND KAGADSSAVL FDEYDHDVQE ENLLDHFSSK HTEELPTVQD
0601: HKGFSSADWS QQPRSESPVD HSTSTLFSRT ETQPSYDLGA NKEEDIPLND TRPPTFDSDG VSSDEETSTD MHILRTHSRG SDYSENKMFN KNSGKSVPDV
0701: IEDHESRPSK QYQNPPGSDV FRKEQNSDGS PRYDYSGAQE NLGRLQSRDY DLSEEETEPH KLKGTSSGIT GANENRPSPF RMPTSATSDD SDDGDLGLNY
0801: GRLTPGLRNK LRQGPQYKIS GDNLLRKQSL EGAPASIEES VHFKENDPSS EQMGDTPKGS RATKNSFGAN YHSEHLDGRH TVGKPLESRS SMTRNDFYSG
0901: DTGKLSERSG SPISSPAKTS VRENSIQEPH LERPGSGVRR ESRSRTVRTF FDSDESEEEL ERRRSGRTKL SKEQIQSRRT REVAPDTKRD GRARAGAPYA
1001: VETESMPKSP AKAFSNSSTE QRKAAPAYSR VSVQQSSPNP VRIEPPTARD RWQEDEPEGS SSPENEGNRE TSAETLKVST PTAGPAHVHP KLPTDYDSFA
1101: AHFKSLRTNR R
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.