Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 89.93 | 88.94 |
| Zm00001d028142_P001 | Maize | cytosol | 5.78 | 62.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 5.68 | 61.0 |
| CDY04642 | Canola | cytosol | 8.2 | 58.67 |
| Solyc04g007230.2.1 | Tomato | mitochondrion | 11.28 | 37.46 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.57 | 36.14 |
| Solyc04g072560.2.1 | Tomato | nucleus, unclear | 16.22 | 32.95 |
| Solyc02g085830.2.1 | Tomato | mitochondrion | 6.06 | 31.25 |
| KRH41442 | Soybean | cytosol | 12.12 | 29.15 |
| KRH49036 | Soybean | mitochondrion | 27.49 | 28.02 |
| KRH74171 | Soybean | mitochondrion | 27.4 | 27.63 |
| Solyc02g083130.2.1 | Tomato | plastid | 13.79 | 27.26 |
| Os01t0706400-01 | Rice | plasma membrane | 26.0 | 25.34 |
| Solyc05g009550.2.1 | Tomato | mitochondrion | 9.97 | 25.06 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 21.16 | 24.23 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 25.07 | 24.21 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 25.07 | 24.08 |
| CDY35879 | Canola | mitochondrion | 20.13 | 23.56 |
| Bra039012.1-P | Field mustard | mitochondrion | 20.13 | 23.56 |
| Bra011109.1-P | Field mustard | mitochondrion | 20.13 | 23.48 |
| CDX82713 | Canola | mitochondrion | 19.94 | 23.29 |
| CDY43502 | Canola | mitochondrion | 20.22 | 23.21 |
| TraesCS3B01G288900.2 | Wheat | plastid | 24.79 | 23.09 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 24.04 | 23.08 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 24.88 | 22.57 |
| EES03498 | Sorghum | nucleus, plastid | 25.26 | 21.91 |
| AT4G29440.1 | Thale cress | mitochondrion | 22.09 | 21.74 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 24.51 | 21.72 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 24.14 | 20.8 |
| Solyc06g066690.2.1 | Tomato | nucleus | 5.68 | 19.74 |
| Solyc12g010700.1.1 | Tomato | cytosol | 8.29 | 19.65 |
| Solyc03g120120.2.1 | Tomato | nucleus | 8.39 | 18.91 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 19.94 | 18.15 |
| Solyc12g043150.1.1 | Tomato | nucleus | 8.11 | 17.06 |
| Solyc07g022860.2.1 | Tomato | nucleus | 5.13 | 9.98 |
| Solyc07g054230.2.1 | Tomato | nucleus | 3.54 | 8.46 |
Protein Annotations
| EnsemblPlants:Solyc07g032230.2.1 | EnsemblPlantsGene:Solyc07g032230.2 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 | SEG:seg |
| UniParc:UPI000276B02C | UniProt:K4CDG5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7:-:36270767..36276528
Molecular Weight (calculated)
117425.0 Da
IEP (calculated)
6.823
GRAVY (calculated)
-0.880
Length
1073 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLTKSFNSTK CKMSLKLASS RLKLLKNKKE VQVKQMKREL SQLLDSGQDR TARIRVEHVL REEKMMAAYD LIEIYCELIV ARLPIIESQK NCPIDLKEAI
0101: TSVVFASPRC GDIPELVDVR KHLTAKYGKE FISAAVELRP NCGVSRMLVE KLSAKAPDGQ TKMRILGAIA EEHGVKWDPK SVEETESVPS NDLLNGSGSL
0201: EKAGNIHEDP LHLNASVMRL PLDHCKRPNA SSNPQEQNAR SSLETQSFDS AYSGGRGVTP SSNYHHGVSP SGSRDERSEI GQSVPGDGKF SMDRQNWNME
0301: FKDATSAAQA AAESAERASL AARAAAELSR VSRQYSSESQ RPEVQSLVGG GRGMYDTSIH EHFSKDSANS SLSDRNPRLQ NGRIDSLHHE NLARATRQFH
0401: DDDHATSGGS GPGNYGSSSM HEHFPKDSVV SSSPNRTSRF QQERTESLQH DNMPRATRHD NDMHGTFDRP DSQVSAGATG SINTDNSFPS VGEGYKYMQK
0501: SLSKADSEMI TRKSVGRTES ESTGSFKNEL VEDFNYFGEE ASRKDPKINS SESYLSASGF GENIHHSNQQ SYGYAKTNDP FNNVYQGHIP SETVSKSSHD
0601: SASVAFDDSG SEEDYNIKFD SDPTYDDQQA KLYFPSPERK SPTYNSAIKE SWSFDSNKSQ EESSMTSEIF VEKQSPQLYK SLAAAGDNSR QENVVPSFDD
0701: SDGMNSESDS EIVQHPIGTD GNKWLPALPR TQTDHDTLAS SVSDSEKAFT FGKLTGGLKH KGHIPPPYLR SQLNSVPSSV ENAKGSPAVT SQDVAPPKSS
0801: VGLGMRMKID DKSSSRLDDT HHASDTDSSD AEFSQEASSY SQRTYSQKRG SEVNTKYAGL RGSSTYFDSD SSDSEAGPKK HSFAGRSQLN SGISRRTKAS
0901: SSSFDTNISS KSKISSETAV NSDSGVDGKP INCSFGIKTQ EPLKPVRNSY AADTQKTQRL TKNFYSSESH ESPTDKRISL EQPSAGPTVP MPVIQTRITS
1001: HERRQKMGRV EKPSSSSQMA AASGNNDVPK APASSGDKFS SADSMKKASH VHPKLPDYDD IASKLLSLRT SPK
0101: TSVVFASPRC GDIPELVDVR KHLTAKYGKE FISAAVELRP NCGVSRMLVE KLSAKAPDGQ TKMRILGAIA EEHGVKWDPK SVEETESVPS NDLLNGSGSL
0201: EKAGNIHEDP LHLNASVMRL PLDHCKRPNA SSNPQEQNAR SSLETQSFDS AYSGGRGVTP SSNYHHGVSP SGSRDERSEI GQSVPGDGKF SMDRQNWNME
0301: FKDATSAAQA AAESAERASL AARAAAELSR VSRQYSSESQ RPEVQSLVGG GRGMYDTSIH EHFSKDSANS SLSDRNPRLQ NGRIDSLHHE NLARATRQFH
0401: DDDHATSGGS GPGNYGSSSM HEHFPKDSVV SSSPNRTSRF QQERTESLQH DNMPRATRHD NDMHGTFDRP DSQVSAGATG SINTDNSFPS VGEGYKYMQK
0501: SLSKADSEMI TRKSVGRTES ESTGSFKNEL VEDFNYFGEE ASRKDPKINS SESYLSASGF GENIHHSNQQ SYGYAKTNDP FNNVYQGHIP SETVSKSSHD
0601: SASVAFDDSG SEEDYNIKFD SDPTYDDQQA KLYFPSPERK SPTYNSAIKE SWSFDSNKSQ EESSMTSEIF VEKQSPQLYK SLAAAGDNSR QENVVPSFDD
0701: SDGMNSESDS EIVQHPIGTD GNKWLPALPR TQTDHDTLAS SVSDSEKAFT FGKLTGGLKH KGHIPPPYLR SQLNSVPSSV ENAKGSPAVT SQDVAPPKSS
0801: VGLGMRMKID DKSSSRLDDT HHASDTDSSD AEFSQEASSY SQRTYSQKRG SEVNTKYAGL RGSSTYFDSD SSDSEAGPKK HSFAGRSQLN SGISRRTKAS
0901: SSSFDTNISS KSKISSETAV NSDSGVDGKP INCSFGIKTQ EPLKPVRNSY AADTQKTQRL TKNFYSSESH ESPTDKRISL EQPSAGPTVP MPVIQTRITS
1001: HERRQKMGRV EKPSSSSQMA AASGNNDVPK APASSGDKFS SADSMKKASH VHPKLPDYDD IASKLLSLRT SPK
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.