Factsheet for Bra039012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35879	Canola	mitochondrion	100.0	100.0
CDX82713	Canola	mitochondrion	94.11	93.91
AT2G19710.1	Thale cress	mitochondrion, nucleus	74.15	72.57
Zm00001d028142_P001	Maize	cytosol	6.54	60.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	6.43	59.0
Bra011109.1-P	Field mustard	mitochondrion	50.93	50.76
Bra012478.1-P	Field mustard	mitochondrion	12.0	34.06
Bra011633.1-P	Field mustard	mitochondrion, plastid	15.81	33.33
Bra010522.1-P	Field mustard	plastid	15.27	33.25
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	19.74	31.15
Bra036745.1-P	Field mustard	nucleus	17.34	28.09
KRH49036	Soybean	mitochondrion	29.66	25.83
KRH74171	Soybean	mitochondrion	29.55	25.47
KRH41442	Soybean	cytosol	12.21	25.11
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	4.47	23.7
TraesCS3B01G284600.1	Wheat	nucleus	27.48	22.68
TraesCS3D01G253500.1	Wheat	nucleus	27.37	22.47
Os01t0706400-01	Rice	plasma membrane	26.94	22.43
TraesCS3A01G252800.1	Wheat	cytosol	27.15	22.27
Bra021112.1-P	Field mustard	nucleus	5.67	21.76
TraesCS3B01G288900.2	Wheat	plastid	27.26	21.7
HORVU3Hr1G066420.1	Barley	nucleus	27.7	21.47
Bra011340.1-P	Field mustard	nucleus	2.18	21.28
Zm00001d011684_P002	Maize	nucleus, plastid	27.37	20.73
Bra019826.1-P	Field mustard	mitochondrion	11.12	20.65
PGSC0003DMT400030456	Potato	mitochondrion, nucleus, plastid	24.1	20.37
EES03498	Sorghum	nucleus, plastid	27.26	20.21
Bra006177.1-P	Field mustard	mitochondrion	7.74	20.17
Solyc07g032230.2.1	Tomato	nucleus	23.56	20.13
Bra027239.1-P	Field mustard	plastid	5.45	19.76
GSMUA_Achr1P14380_001	Banana	nucleus	26.83	19.76
Bra013184.1-P	Field mustard	mitochondrion	5.02	19.01
Bra008502.1-P	Field mustard	nucleus	7.52	18.21
Bra018962.1-P	Field mustard	extracellular, vacuole	6.76	17.42
VIT_11s0016g02580.t01	Wine grape	mitochondrion	19.63	15.27
Bra016733.1-P	Field mustard	mitochondrion	11.01	13.52
Bra030391.1-P	Field mustard	nucleus	5.78	10.6

Protein Annotations

EnsemblPlants:Bra039012.1	EnsemblPlants:Bra039012.1-P	EnsemblPlantsGene:Bra039012	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF13	PFAM:PF03398
SEG:seg	UniParc:UPI0002541008	UniProt:M4FD42	MapMan:35.2	:	:

Description

AT2G19710 (E=1e-304) | unknown protein

Coordinates

chrA07:-:817863..821230

Molecular Weight (calculated)

102739.0 Da

IEP (calculated)

6.881

GRAVY (calculated)

-1.093

Length

917 amino acids

Sequence
(BLAST)

001: MKKVLHRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLEAG NTPTARIRVE HVVREEKTVA AYELIGIYCE LIVVRLGVIE SQKNCPIDLK
101: EAVASVLFAS QRLSDVPELS EIVKQFTTKY GKDFATSAIE LRPDSGVSRL LVDKLSVKAP DGPTKVKILT EIAEEHNVVW EAQSFVEPDP RDKFLSGASS
201: FQSASSVNVV DSSRIPNKEQ YSSVQAPAPV NVQHGASERN SYYASDGRSS SRSDNVTSGT ADDYHHPNAR PSRSRPDEGE CRNPNHGESK QRWETEFVDS
301: TDAARAAAEA AERASFAARA AAELSSKERM TRQNSTESHM SSASVNFRNE PSHRRDRSNV SEDHSSPRHN VRMQYQDMNR TQQDRYGRGK EPENPPAVQP
401: SERHYLNNNS RKSGSFGREK QPSEDKTDLN VGYSEDVQFK KQSSRASSHS HSSNYSDEHV IDSDYMKSPK AVEENIFATE YDRQSQSSFK DKDLHDHGHD
501: DAGTFDDYSS FFDKPKFDAE DDEYDHGVGF SLLGSKAPSL TPTPAASWSF KSDHSKSHGN HSSSSQVFQE SPLFDDVPAS PPAFYHEPDR HAKFDNYDPN
601: SESEDDQPRH RGKVDETVNL TSHRSQKFEV SDPVGREFCP VETDEHKDDS RTREESDSEA DALTGLSFKP LVGGFRNKKT LPPYRMSLAR NETSSKSGKE
701: HNGTDDAGKS VSTPRSSRKA SISEKRPSSI PPQPSSSDDD DSEIQLRSRR PETKPQTSYR DSRFSHDDPE EELPGQAFVR SQEKTHKPTT RVRDQNRSNF
801: KIPASAWYED DEEEVERVSA KPVKITGVSL RTKGQVKAHE KRSFPVTPTR TNQESHDQPS PKSTSGQKTV SSSVPPTVKS PDPETPSRER ASHVHPNLPD
901: CDDIFARLGA LRTPNRR

Best Arabidopsis Sequence Match ( AT2G19710.1 )
(BLAST)

001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.