Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028142_P001 | Maize | cytosol | 8.08 | 89.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 7.99 | 88.0 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 63.49 | 62.58 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 62.76 | 62.2 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 62.22 | 61.27 |
| TraesCS3B01G288900.2 | Wheat | plastid | 63.22 | 60.42 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 63.76 | 59.34 |
| CDY04642 | Canola | cytosol | 7.63 | 56.0 |
| EES03498 | Sorghum | nucleus, plastid | 58.31 | 51.9 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 55.86 | 50.78 |
| Os01t0687700-01 | Rice | mitochondrion, plasma membrane | 11.17 | 38.56 |
| Os09t0547200-01 | Rice | mitochondrion | 14.44 | 33.4 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.44 | 33.05 |
| Os03t0257500-01 | Rice | mitochondrion | 5.45 | 31.09 |
| Os08t0175200-01 | Rice | nucleus | 15.35 | 30.12 |
| KRH49036 | Soybean | mitochondrion | 26.61 | 27.83 |
| KRH74171 | Soybean | mitochondrion | 26.7 | 27.63 |
| CDY35879 | Canola | mitochondrion | 22.43 | 26.94 |
| Bra039012.1-P | Field mustard | mitochondrion | 22.43 | 26.94 |
| KRH41442 | Soybean | cytosol | 10.9 | 26.91 |
| CDX82713 | Canola | mitochondrion | 22.34 | 26.77 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 22.43 | 26.36 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 25.79 | 26.18 |
| Solyc07g032230.2.1 | Tomato | nucleus | 25.34 | 26.0 |
| Bra011109.1-P | Field mustard | mitochondrion | 21.34 | 25.54 |
| CDY43502 | Canola | mitochondrion | 21.16 | 24.92 |
| Os03t0710000-01 | Rice | plasma membrane | 7.72 | 23.94 |
| AT4G29440.1 | Thale cress | mitochondrion | 22.34 | 22.57 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 25.07 | 22.17 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 18.62 | 17.39 |
| Os03t0257600-01 | Rice | mitochondrion | 7.72 | 15.74 |
| Os02t0159200-01 | Rice | nucleus | 8.63 | 14.07 |
| Os06t0687000-00 | Rice | mitochondrion | 8.36 | 12.62 |
Protein Annotations
| EMBL:AK066981 | EnsemblPlants:Os01t0706400-01 | EnsemblPlantsGene:Os01g0706400 | EntrezGene:4327673 | Gene3D:1.20.1260.60 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 |
| PFAM:PF03398 | ProteinID:BAD82253.1 | ProteinID:BAF05930.2 | ProteinID:BAS73941.1 | ProteinID:BAS73943.1 | RefSeq:XP_015621218.1 |
| SEG:seg | UniParc:UPI000049E9E6 | UniProt:Q5N8F0 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF292, eukaryotic domain containing protein. (Os01t0706400-01);Hypothetical conserved gene. (Os01t0706400-02);Hypothetical conserved gene. (Os01t0706400-03)
Coordinates
chr1:+:29306448..29312511
Molecular Weight (calculated)
121527.0 Da
IEP (calculated)
6.355
GRAVY (calculated)
-1.027
Length
1101 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNRSKAKLSG VLHKGFKPDK CKTALRMALA RIKLLRNRKE VQVRQMRREV AQLLEADQDQ TARIRVEHVI REEKFMQAYD LIEVYCELMV ARMSIIDSQK
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KHFTSKYGKE FAAAALEVRP DSGVSRLVIE KLSAGAPDTQ TKIKTLTSIA EEHNIKWEPK AFEEKLPKQN
0201: DDLLHVTSTY PGGNIPTRGS SASNSGMPTS QPAAPSHSYM ESSNSHMSTA HSYSSAEVPD NRAPYVTANS NAFPQENRRG SDAPMSPRSQ HGPNSFSHDT
0301: AGGSNVSRPY SQYGATVPDT DTASRREEFN HSRERKSSVS GSNWNIEFKD ATSAAQAAAE SAEMASIAAR AAAQLASRGN LSAEQNTGAF ESPAYTHETT
0401: PRKQQAEHLM KDGQRSSNEQ SSGAYDPRLI SSNDARKDGG RTETSRVGSQ NMPTNSLGQS PPYSPHIHSD EYDMPTDPHR SHSPDPQYSD DSSEKESNFG
0501: RPEDHQFNLP GERLSEAQLG GHNIKDTESK HATFDQENTD NYYSNYSSSH GTFTHGSSTI WDSQNDKAGP DSSAVVFDQY DSDVGEENLL DPFSSKHTEE
0601: PTVEDHKGFS SADWGQQHRN ESPVNHSSST LFSGTEANRK DVSSPHSYDN VPPTFDSDGV SSDEEMTTGM HARSLRSHSR GSDFSESREN IISGKVVHDV
0701: NENIEDHVSM SRKNYLNSSG SNAFNKERYS ESSPRSDYSW VDGELDRTKI RDLEEERVPH KLEGASSLTT GENKNQLFSL GRQTSTSSAD YDEGDPGLNF
0801: GRLTPGLRNK LRQPPPYIKD SGNTSLHKVP TAIEKSVHSE EDTSFGNTRN TSTGMARSSF GADYNSELHD QNQSVGASVE ARSTMRNYYG SEGDRGKLSE
0901: QSYNAPSSVM NKSSGGVNSS QDLYHEKPGA GARRGTTTKT AKSYFDSDDS EDELAQRKEV QTKWSREQIQ SRRTQMTSDT KKETGVRVGV QHADETEAKS
1001: PAGSFSRFTE QRRDSPVYSR VPVPRTSPKP VRVEPPLGKG KSQEADLNTV SVTGKEENTE SPAETPKEST SKTAPSHVHP KLPTDYDSFA AHFMSLRTNR
1101: R
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KHFTSKYGKE FAAAALEVRP DSGVSRLVIE KLSAGAPDTQ TKIKTLTSIA EEHNIKWEPK AFEEKLPKQN
0201: DDLLHVTSTY PGGNIPTRGS SASNSGMPTS QPAAPSHSYM ESSNSHMSTA HSYSSAEVPD NRAPYVTANS NAFPQENRRG SDAPMSPRSQ HGPNSFSHDT
0301: AGGSNVSRPY SQYGATVPDT DTASRREEFN HSRERKSSVS GSNWNIEFKD ATSAAQAAAE SAEMASIAAR AAAQLASRGN LSAEQNTGAF ESPAYTHETT
0401: PRKQQAEHLM KDGQRSSNEQ SSGAYDPRLI SSNDARKDGG RTETSRVGSQ NMPTNSLGQS PPYSPHIHSD EYDMPTDPHR SHSPDPQYSD DSSEKESNFG
0501: RPEDHQFNLP GERLSEAQLG GHNIKDTESK HATFDQENTD NYYSNYSSSH GTFTHGSSTI WDSQNDKAGP DSSAVVFDQY DSDVGEENLL DPFSSKHTEE
0601: PTVEDHKGFS SADWGQQHRN ESPVNHSSST LFSGTEANRK DVSSPHSYDN VPPTFDSDGV SSDEEMTTGM HARSLRSHSR GSDFSESREN IISGKVVHDV
0701: NENIEDHVSM SRKNYLNSSG SNAFNKERYS ESSPRSDYSW VDGELDRTKI RDLEEERVPH KLEGASSLTT GENKNQLFSL GRQTSTSSAD YDEGDPGLNF
0801: GRLTPGLRNK LRQPPPYIKD SGNTSLHKVP TAIEKSVHSE EDTSFGNTRN TSTGMARSSF GADYNSELHD QNQSVGASVE ARSTMRNYYG SEGDRGKLSE
0901: QSYNAPSSVM NKSSGGVNSS QDLYHEKPGA GARRGTTTKT AKSYFDSDDS EDELAQRKEV QTKWSREQIQ SRRTQMTSDT KKETGVRVGV QHADETEAKS
1001: PAGSFSRFTE QRRDSPVYSR VPVPRTSPKP VRVEPPLGKG KSQEADLNTV SVTGKEENTE SPAETPKEST SKTAPSHVHP KLPTDYDSFA AHFMSLRTNR
1101: R
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.