Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G284600.1 | Wheat | nucleus | 92.8 | 96.22 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 91.49 | 94.36 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 90.8 | 93.56 |
| Zm00001d028142_P001 | Maize | cytosol | 7.47 | 86.0 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 87.41 | 85.12 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 7.38 | 85.0 |
| Os01t0706400-01 | Rice | plasma membrane | 60.42 | 63.22 |
| CDY04642 | Canola | cytosol | 7.03 | 54.0 |
| EES03498 | Sorghum | nucleus, plastid | 55.99 | 52.14 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 53.56 | 50.95 |
| TraesCS3B01G296700.1 | Wheat | mitochondrion, plastid | 9.98 | 36.05 |
| TraesCS3B01G498800.1 | Wheat | cytosol | 14.24 | 32.09 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 15.71 | 31.15 |
| TraesCS5B01G347800.1 | Wheat | mitochondrion | 13.02 | 30.99 |
| TraesCS4B01G219300.1 | Wheat | mitochondrion | 4.86 | 30.43 |
| CDY35879 | Canola | mitochondrion | 21.7 | 27.26 |
| Bra039012.1-P | Field mustard | mitochondrion | 21.7 | 27.26 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 22.14 | 27.21 |
| CDX82713 | Canola | mitochondrion | 21.7 | 27.2 |
| KRH49036 | Soybean | mitochondrion | 24.57 | 26.88 |
| KRH74171 | Soybean | mitochondrion | 24.57 | 26.6 |
| Bra011109.1-P | Field mustard | mitochondrion | 20.49 | 25.65 |
| CDY43502 | Canola | mitochondrion | 20.4 | 25.13 |
| Solyc07g032230.2.1 | Tomato | nucleus | 23.09 | 24.79 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 23.26 | 24.7 |
| KRH41442 | Soybean | cytosol | 9.55 | 24.66 |
| TraesCS4B01G044800.1 | Wheat | mitochondrion | 6.77 | 23.21 |
| TraesCS4B01G219400.1 | Wheat | mitochondrion | 5.3 | 23.11 |
| AT4G29440.1 | Thale cress | mitochondrion | 21.61 | 22.84 |
| TraesCS4B01G045100.1 | Wheat | mitochondrion | 6.94 | 22.66 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 24.05 | 22.25 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 17.19 | 16.79 |
| TraesCS4B01G219200.1 | Wheat | mitochondrion, plastid | 7.55 | 16.05 |
| TraesCS6B01G161300.1 | Wheat | cytosol, nucleus, plastid | 8.25 | 13.32 |
| TraesCS7B01G345200.1 | Wheat | cytosol, nucleus, plastid | 7.64 | 12.1 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G288900.2 | EnsemblPlantsGene:TraesCS3B01G288900 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:+:463251510..463256858
Molecular Weight (calculated)
127299.0 Da
IEP (calculated)
6.332
GRAVY (calculated)
-1.001
Length
1152 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHRSKGKLSG VLSKGFKPDK WSVQIVSARR FLLLPSPLVS AGCEIERLLL LLFLFFWRLS KIALKMAMAR IKLLRNKKEV QVRQMRREVA QLLDGNQDQT
0101: ARIRVEHVIR EEKFMQAYDL IEVYCELIVA RMSIIDSQKT CPIDLKEAIA SVIFASMRCS DVTELADVRK NFTSKYGKEF ATSALEVRPD SGVNHLVIEK
0201: LSAGAPDVQT KTKTLSSIAA EHNIKWEPKA FEEQKQNEDR MYGSTYSGGN IPTSGSSASS VPTPQPAAAP YSSVQPATSR VPAGPSYESS EAPANRNPHG
0301: TANSNASTQE NRRGSDASVP PSFQHGATTY SSANIPGSNN YSNTGSSSVS RPHSQFGSTV PDSVSRTEEI NRPRERKSSV SGSNWNVEFK DAASAAQAAA
0401: DSAEMASIAA RAAAQLASRG NFYADQDTGA YESTAYMNDN TPRKQQAGRL MKDGKSFNEQ SSGINDPRMI SSNARKDEER AETNRASSQN MSTPYSSQLH
0501: SYAPESHTDH DMPTEPHHAH SSEPPYFNDS SEPPYFDDSS EKESNIRRPE DHPFDLHEER LPDAGFDWHH TKDIGSRQTS FDQESRNNHY SNFSASHGGS
0601: STSWDNQNDK AGADSSAVLF DEYDHDVQEE NLLDHFSSKH TEELPTVQDH KGFSSADWSQ QPRSESPVDR STSTLFSRTE TQPSYDLGAN KEDILLNDTS
0701: PPTFDSDGVS SDEETSTNMH ILRTHSRGSD YSENKMFNKN SGKSFPDVIE DHESRPSKQY QNPPGSDVFR KEQNSDGSPR YDYSGAQGNL GRLQSRDYDL
0801: SEEETEPHKL KGTSSGITGA NENRPSPFRM PTSATSDDSD DGDLGLNYGR LTPGLRNKLR QGPQYKISGD NLVRKQSLEG APASIEESVH FKENDPSSEQ
0901: MGDTPKGSRT TKNSFGANYH SEHLDGRHTV GKPVESRSSM TRNDFYSGDT GKLSERSGSP ISSPAKTSVR ENSIQESGVR RESRSRTART FFDSDESEEE
1001: LERRRSVQTK LSKEQIQSRR TREVAPDAKR DGRARAGAQY AVETESTPKS PAKAFSNSST EQRKAAPAYS RVSVQQSSPN PARIEPPAAR GRWQEDEPDG
1101: SSSPENEGNA ETSAETLKVS TPTAGPAHVH PKLPTDYDSF AAHFKSLRTN RR
0101: ARIRVEHVIR EEKFMQAYDL IEVYCELIVA RMSIIDSQKT CPIDLKEAIA SVIFASMRCS DVTELADVRK NFTSKYGKEF ATSALEVRPD SGVNHLVIEK
0201: LSAGAPDVQT KTKTLSSIAA EHNIKWEPKA FEEQKQNEDR MYGSTYSGGN IPTSGSSASS VPTPQPAAAP YSSVQPATSR VPAGPSYESS EAPANRNPHG
0301: TANSNASTQE NRRGSDASVP PSFQHGATTY SSANIPGSNN YSNTGSSSVS RPHSQFGSTV PDSVSRTEEI NRPRERKSSV SGSNWNVEFK DAASAAQAAA
0401: DSAEMASIAA RAAAQLASRG NFYADQDTGA YESTAYMNDN TPRKQQAGRL MKDGKSFNEQ SSGINDPRMI SSNARKDEER AETNRASSQN MSTPYSSQLH
0501: SYAPESHTDH DMPTEPHHAH SSEPPYFNDS SEPPYFDDSS EKESNIRRPE DHPFDLHEER LPDAGFDWHH TKDIGSRQTS FDQESRNNHY SNFSASHGGS
0601: STSWDNQNDK AGADSSAVLF DEYDHDVQEE NLLDHFSSKH TEELPTVQDH KGFSSADWSQ QPRSESPVDR STSTLFSRTE TQPSYDLGAN KEDILLNDTS
0701: PPTFDSDGVS SDEETSTNMH ILRTHSRGSD YSENKMFNKN SGKSFPDVIE DHESRPSKQY QNPPGSDVFR KEQNSDGSPR YDYSGAQGNL GRLQSRDYDL
0801: SEEETEPHKL KGTSSGITGA NENRPSPFRM PTSATSDDSD DGDLGLNYGR LTPGLRNKLR QGPQYKISGD NLVRKQSLEG APASIEESVH FKENDPSSEQ
0901: MGDTPKGSRT TKNSFGANYH SEHLDGRHTV GKPVESRSSM TRNDFYSGDT GKLSERSGSP ISSPAKTSVR ENSIQESGVR RESRSRTART FFDSDESEEE
1001: LERRRSVQTK LSKEQIQSRR TREVAPDAKR DGRARAGAQY AVETESTPKS PAKAFSNSST EQRKAAPAYS RVSVQQSSPN PARIEPPAAR GRWQEDEPDG
1101: SSSPENEGNA ETSAETLKVS TPTAGPAHVH PKLPTDYDSF AAHFKSLRTN RR
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.