CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	82.51	63.34
CDY04642	Canola	cytosol	11.88	35.33
KRH35947	Soybean	mitochondrion	15.92	21.91
KRG90825	Soybean	mitochondrion	15.7	21.6
KRH69704	Soybean	mitochondrion	20.18	20.55
KRH35011	Soybean	mitochondrion	17.49	20.05
KRH07948	Soybean	mitochondrion	19.73	19.95
KRH08570	Soybean	nucleus	22.2	18.75
KRH70215	Soybean	nucleus	21.75	18.06
KRH49036	Soybean	mitochondrion	40.81	17.28
KRG89505	Soybean	mitochondrion	7.17	16.93
KRH74171	Soybean	mitochondrion	39.46	16.54
KRH26063	Soybean	cytosol	6.95	14.83
KRH55350	Soybean	extracellular	6.73	14.71
KRH45249	Soybean	mitochondrion	12.11	13.64
Bra011109.1-P	Field mustard	mitochondrion	27.58	13.37
KRH23458	Soybean	mitochondrion	11.88	13.28
CDY43502	Canola	mitochondrion	27.58	13.16
KRH75395	Soybean	mitochondrion	11.88	13.15
Zm00001d028142_P001	Maize	cytosol	2.91	13.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	2.91	13.0
AT2G19710.1	Thale cress	mitochondrion, nucleus	27.13	12.91
CDX82713	Canola	mitochondrion	25.56	12.4
CDY35879	Canola	mitochondrion	25.11	12.21
Bra039012.1-P	Field mustard	mitochondrion	25.11	12.21
Solyc07g032230.2.1	Tomato	nucleus	29.15	12.12
PGSC0003DMT400030456	Potato	mitochondrion, nucleus, plastid	29.37	12.07
AT4G29440.1	Thale cress	mitochondrion	27.8	11.38
KRH70127	Soybean	mitochondrion, nucleus	9.64	11.32
KRH47048	Soybean	mitochondrion	9.64	11.26
KRH22410	Soybean	mitochondrion, nucleus	16.59	11.11
KRH01764	Soybean	mitochondrion	10.99	11.09
Os01t0706400-01	Rice	plasma membrane	26.91	10.9
KRH26928	Soybean	nucleus	16.14	10.86
KRH46919	Soybean	mitochondrion	9.87	10.73
KRH44367	Soybean	mitochondrion	7.62	10.56
GSMUA_Achr1P14380_001	Banana	nucleus	28.25	10.12
TraesCS3B01G284600.1	Wheat	nucleus	25.11	10.08
TraesCS3D01G253500.1	Wheat	nucleus	25.11	10.03
TraesCS3A01G252800.1	Wheat	cytosol	25.11	10.02
VIT_11s0016g02580.t01	Wine grape	mitochondrion	25.78	9.75
Zm00001d011684_P002	Maize	nucleus, plastid	26.46	9.74
EES03498	Sorghum	nucleus, plastid	26.68	9.62
HORVU3Hr1G066420.1	Barley	nucleus	25.34	9.55
TraesCS3B01G288900.2	Wheat	plastid	24.66	9.55
KRH39280	Soybean	mitochondrion, nucleus	12.33	7.48
KRH48400	Soybean	mitochondrion, nucleus	11.44	6.94
KRH60286	Soybean	nucleus	9.42	5.48
KRH41578	Soybean	nucleus	9.64	5.39
KRH06586	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02004766	EnsemblPlants:KRH41442	EnsemblPlantsGene:GLYMA_08G030300	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF13	PFAM:PF03398	ProteinID:KRH41442
ProteinID:KRH41442.1	SEG:seg	UniParc:UPI0006EDEFD9	UniProt:A0A0R0IK06	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:+:2425542..2428066

Molecular Weight (calculated)

49209.9 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.521

Length

446 amino acids

Sequence
(BLAST)

001: MASYDLIKIY CDLIAACMQM IESQRNCPID LKEAISSVIF TPPRCSDILE LVDVKKHIMA KYGRQFVSAA VELRPDSAVN RLLVEKFSTN APDCPTKIKI
101: PTAIAEEHNV QWQPSLEEND VNASQDFLKA TYVKPSQLHV PPVGDERRPP NLRAYASNQL NEMHNISYEK NASLNSSGNS FGHLRNLVLR CMSARAAADL
201: SNREKLTSQC SSELKSSLLL LSTFRRSSFE IHNEQAIVRE QHSLVRSPNE HRMNSNENVV KLYQSASLTS HNAFCEEKPF GYVYGVADIY PNADNPQMKK
301: VQGEANKKSS TRDSNAYFDS DASESEDGLP KQNSVTLANS GSGLSRRMLA PSKTGTCFIL KDDSLSKASK TSGASSGHGS AEHAASKSNS EPKSEEIIIL
401: SAMVQPSSSL TTTMIPDKEE ASHVHPKLPD YDTFAAQFLS RKKGLQ

Best Arabidopsis Sequence Match ( AT2G19710.1 )
(BLAST)

001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.