CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08570	Soybean	nucleus	91.99	93.56
VIT_18s0164g00040.t01	Wine grape	nucleus	64.06	63.82
PGSC0003DMT400070850	Potato	cytosol	58.1	59.09
Solyc04g072560.2.1	Tomato	nucleus, unclear	57.17	58.14
GSMUA_Achr5P23420_001	Banana	mitochondrion	50.09	54.9
KRH35011	Soybean	mitochondrion	38.55	53.21
Bra036745.1-P	Field mustard	nucleus	53.63	50.88
CDY46461	Canola	cytosol, mitochondrion, nucleus	53.63	50.88
CDX91784	Canola	nucleus	54.38	50.34
KXG24567	Sorghum	cytosol, plastid	47.86	49.81
GSMUA_Achr6P02830_001	Banana	cytosol	54.19	49.49
TraesCS3B01G498800.1	Wheat	cytosol	46.18	48.53
TraesCS3A01G459100.1	Wheat	cytosol, plastid	46.0	48.05
HORVU3Hr1G098720.3	Barley	cytosol	45.81	47.95
Zm00001d049479_P003	Maize	cytosol, mitochondrion, plastid	48.6	47.8
TraesCS3D01G451700.1	Wheat	cytosol	45.44	47.66
KRH35947	Soybean	mitochondrion	28.68	47.53
KRG90825	Soybean	mitochondrion	28.31	46.91
Os08t0175200-01	Rice	nucleus	48.23	46.17
Zm00001d024425_P003	Maize	cytosol	48.23	45.68
AT1G34220.1	Thale cress	nucleus	55.12	45.61
CDY48635	Canola	cytosol	26.82	42.99
KRH06586	Soybean	cytosol	4.28	37.7
KRH07948	Soybean	mitochondrion	29.98	36.51
KRH69704	Soybean	mitochondrion	29.24	35.84
KRG89505	Soybean	mitochondrion	12.1	34.39
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	29.61	27.37
KRH45249	Soybean	mitochondrion	19.93	27.02
KRH75395	Soybean	mitochondrion	19.18	25.56
KRH26063	Soybean	cytosol	9.87	25.36
KRH55350	Soybean	extracellular	8.75	23.04
KRH41442	Soybean	cytosol	18.06	21.75
KRH44367	Soybean	mitochondrion	12.29	20.5
KRH46919	Soybean	mitochondrion	15.27	20.0
KRH01764	Soybean	mitochondrion	16.39	19.91
KRH23458	Soybean	mitochondrion	14.34	19.3
KRH47048	Soybean	mitochondrion	13.41	18.85
KRH70127	Soybean	mitochondrion, nucleus	11.55	16.32
KRH49036	Soybean	mitochondrion	31.66	16.14
KRH74171	Soybean	mitochondrion	31.84	16.07
KRH26928	Soybean	nucleus	19.18	15.54
KRH22410	Soybean	mitochondrion, nucleus	18.99	15.32
KRH39280	Soybean	mitochondrion, nucleus	16.57	12.11
KRH48400	Soybean	mitochondrion, nucleus	16.39	11.97
KRH60286	Soybean	nucleus	15.08	10.57
KRH41578	Soybean	nucleus	14.71	9.9

Protein Annotations

EMBL:ACUP02000756	EnsemblPlants:KRH70215	EnsemblPlantsGene:GLYMA_02G075900	EntrezGene:100805899	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF5
PFAM:PF03398	ProteinID:KRH70215	ProteinID:KRH70215.1	SEG:seg	UniParc:UPI000233792E	UniProt:I1JD91
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:6636179..6640425

Molecular Weight (calculated)

59580.2 Da

IEP (calculated)

5.088

GRAVY (calculated)

-0.674

Length

537 amino acids

Sequence
(BLAST)

001: MAMFDSIFNK GFKAAKCKTL LKLTIPRIKL LRNRREIQLK NMRREIAKLL ETGQEATARI RVEHIIREEN MMAAQEIIEL FCELIAVRLP IIESQRECPL
101: DLKEAISSVC FAAPRCADLP ELLQVQMLFA AKYGKEFLSA TTELRPDCGV NRQLIELLSI RAPSPEKKLN LLKEIAVEHD LDWDPEASET EFFKKHEDLL
201: NGPTQFVSGS KLPLPDEKHN EEMHSTHDAP NKEQPDSDSG SDTLEFPEVP KVSVQPNANV ATAPEMVTPL TMEPLEVDLD SPRHSGDFAD AKQEQVEDRS
301: SVHKDEPHTS ICKTENKQFL PFISPPSVSS GSFSARHSDS PPSFSSTKSE GNVDLQDVLA AAHAAAETAE RAAAAARSAA SLAQLRINEL TKKKSSEHVP
401: DSSSSENPFY AGGSNESPTI IEKHFTEQNT AGNSDVHNGN DVEHHQDHYA SPDSHSSSFP SFETLKEDFA SSLPNDHRVL DDKSSSHQPK RLPSMDDDSY
501: FSYPNLFTSQ NSNVGSQAHS DNSRSPHSDN SRSPHDL

Best Arabidopsis Sequence Match ( AT1G34220.2 )
(BLAST)

001: MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4HUX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.