CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69704	Soybean	mitochondrion	89.12	89.73
VIT_00s1235g00010.t01	Wine grape	mitochondrion	54.2	68.68
CDY69937	Canola	plastid	57.37	60.96
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	49.89	60.94
Bra010522.1-P	Field mustard	plastid	57.37	60.09
CDX75521	Canola	plastid	57.6	58.66
CDY41639	Canola	plastid	57.14	58.6
Bra011633.1-P	Field mustard	mitochondrion, plastid	57.6	58.39
CDX69159	Canola	plastid	57.82	57.95
AT4G35730.1	Thale cress	plastid	58.73	55.58
PGSC0003DMT400003908	Potato	plastid	56.92	51.33
Solyc02g083130.2.1	Tomato	plastid	55.56	45.12
EER99304	Sorghum	plastid	47.62	43.75
Os09t0547200-01	Rice	mitochondrion	45.58	42.23
GSMUA_Achr3P26880_001	Banana	mitochondrion	41.27	42.13
TraesCS5D01G353300.1	Wheat	mitochondrion	45.35	41.49
TraesCS5B01G347800.1	Wheat	mitochondrion	45.12	41.12
TraesCS5A01G346800.1	Wheat	plastid	44.67	40.62
KRH35947	Soybean	mitochondrion	29.02	39.51
KRG90825	Soybean	mitochondrion	28.8	39.2
Zm00001d021453_P002	Maize	plastid	46.03	38.81
HORVU5Hr1G086370.1	Barley	nucleus, plastid	44.9	36.26
KRH35011	Soybean	mitochondrion	30.16	34.19
KRG89505	Soybean	mitochondrion	13.83	32.28
KRH06586	Soybean	cytosol	4.31	31.15
KRH08570	Soybean	nucleus	36.51	30.49
KRH70215	Soybean	nucleus	36.51	29.98
KRH26063	Soybean	cytosol	12.47	26.32
KRH45249	Soybean	mitochondrion	23.58	26.26
KRH55350	Soybean	extracellular	12.02	25.98
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	33.33	25.3
KRH75395	Soybean	mitochondrion	22.45	24.57
KRH23458	Soybean	mitochondrion	19.73	21.8
KRH46919	Soybean	mitochondrion	19.95	21.46
KRH01764	Soybean	mitochondrion	21.09	21.04
KRH47048	Soybean	mitochondrion	18.14	20.94
KRH44367	Soybean	mitochondrion	15.19	20.81
KRH41442	Soybean	cytosol	19.95	19.73
KRH70127	Soybean	mitochondrion, nucleus	14.74	17.11
KRH22410	Soybean	mitochondrion, nucleus	23.13	15.32
KRH49036	Soybean	mitochondrion	36.51	15.29
KRH74171	Soybean	mitochondrion	36.05	14.94
KRH26928	Soybean	nucleus	22.45	14.93
KRH48400	Soybean	mitochondrion, nucleus	20.86	12.52
KRH39280	Soybean	mitochondrion, nucleus	20.86	12.52
KRH60286	Soybean	nucleus	19.95	11.49
KRH41578	Soybean	nucleus	19.27	10.65

Protein Annotations

EMBL:ACUP02010125	EnsemblPlants:KRH07948	EnsemblPlantsGene:GLYMA_16G120200	EntrezGene:100781075	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF19
PFAM:PF03398	ProteinID:KRH07948	ProteinID:KRH07948.1	SEG:seg	UniParc:UPI000233B793	UniProt:I1MMY9
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:26823772..26828068

Molecular Weight (calculated)

48856.2 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.480

Length

441 amino acids

Sequence
(BLAST)

001: MTVASAASSR TKRLVKLTLS LLRLGFNSSK CKTAAKMAVA RIKLLRNKRE VVVRQMRRDI ALLLQSGQDA TARIRVEHVM REQNVLAANE FIELFCELVV
101: ARLPIISKQR ECPADLKEGI ASLIFAAPRC SEIPELVALK NIFDKKYGKD FVSAAVDLRP SCGVNRQLIE KLSVRTPPGE VKLKVLKEIA KEHQIDWDTT
201: ESETELLKPP EELIVGPRAF VSASSLPVKH SSNVSVESNQ PATRLSGGGR TEAVYYEDSK SAAEAAAEAA KKAIAAAEVA AYMAMKESIE APQPYAYNDK
301: LYNSGVNSGT FQSNNPAKCG LNKTPKSTTE EKMYRSQSVP RSDHLNSEDT LPDQYGGNDY RRHSYHPTSA HSDIKFDESD CDEEIEAEEP PVVTMPPNRF
401: PPPVPSSMVK QDSRIHVHPK LPDYDELAAR FDALKFKKSQ S

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.