CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g01700.t01	Wine grape	golgi	22.37	36.48
KRH26928	Soybean	nucleus	52.37	30.02
KRH22410	Soybean	mitochondrion, nucleus	52.37	29.88
CDX78503	Canola	mitochondrion	24.74	26.7
Bra006177.1-P	Field mustard	mitochondrion	24.47	26.42
KRH06586	Soybean	cytosol	4.21	26.23
CDX70491	Canola	mitochondrion	25.26	25.33
AT2G14830.1	Thale cress	mitochondrion	25.26	25.0
CDY22873	Canola	mitochondrion	23.42	24.86
CDY33850	Canola	mitochondrion	23.68	24.79
KRH26063	Soybean	cytosol	13.42	24.4
Solyc12g010700.1.1	Tomato	cytosol	28.42	23.84
KRH55350	Soybean	extracellular	12.63	23.53
KRG89505	Soybean	mitochondrion	11.05	22.22
PGSC0003DMT400020212	Potato	cytosol	21.84	21.01
KRH47048	Soybean	mitochondrion	17.11	17.02
PGSC0003DMT400047266	Potato	nucleus	24.21	16.91
KRH44367	Soybean	mitochondrion	13.68	16.15
KRH23458	Soybean	mitochondrion	16.84	16.04
KRH75395	Soybean	mitochondrion	16.58	15.63
KRH45249	Soybean	mitochondrion	16.05	15.4
KRH35011	Soybean	mitochondrion	15.53	15.17
KRH69704	Soybean	mitochondrion	17.11	14.84
KRH35947	Soybean	mitochondrion	12.63	14.81
KRG90825	Soybean	mitochondrion	12.63	14.81
KRH07948	Soybean	mitochondrion	17.11	14.74
Solyc07g054230.2.1	Tomato	nucleus	15.53	13.14
KRH46919	Soybean	mitochondrion	13.16	12.2
KRH08570	Soybean	nucleus	16.58	11.93
KRH01764	Soybean	mitochondrion	13.68	11.76
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	17.89	11.7
KRH70215	Soybean	nucleus	16.32	11.55
AT1G51900.1	Thale cress	mitochondrion	22.11	10.85
KRH48400	Soybean	mitochondrion, nucleus	19.21	9.93
KRH39280	Soybean	mitochondrion, nucleus	18.95	9.8
KRH60286	Soybean	nucleus	19.47	9.66
KRH41442	Soybean	cytosol	11.32	9.64
KRH41578	Soybean	nucleus	19.21	9.15
KRH49036	Soybean	mitochondrion	20.0	7.22
KRH74171	Soybean	mitochondrion	20.0	7.14

Protein Annotations

EMBL:ACUP02000748	EnsemblPlants:KRH70127	EnsemblPlantsGene:GLYMA_02G070400	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF18	PFAM:PF03398	ProteinID:KRH70127
ProteinID:KRH70127.1	SEG:seg	UniParc:UPI000295CAC9	UniProt:K7K6V4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:-:6182700..6185746

Molecular Weight (calculated)

43283.4 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.698

Length

380 amino acids

Sequence
(BLAST)

001: MFSIFFRWPK ASKCKKMIKR AQCRLRHLKS KREVMAMQIG KDLSELIQNG HQETAIMRYQ ISTNSLKISA FHHKISLMVH YAKSRDCPPD IDEAVSSLIF
101: ASAGCGDFPE LYVIRKLFGP SVAVELFPSN LVYKKSLTDD QKYKVVDEIA SDNCLQQEVK EHIGNQLVES DGETNHTIAE YTSTENSALV YSVQQYPPCG
201: EEMEKEDFPD LQNKGETMAL GPSSEGVSLL PYAEAMVEYY VEEIEESENF ESKDGQEESA SERSSIRVGL RKSKGAPKKR LKRRSSLLER QGTTENGCII
301: YYQQPCKSPS TQNYGTTHYD KKCYSRALTM TTEQPKNYKD ELLRTYSRSS PHPKHVHPKL PQCEDIVAIF TALKRERGRG

Best Arabidopsis Sequence Match ( AT2G14830.1 )
(BLAST)

001: MFCFLFGWRR TSKCKSVVKQ LQCRLNLLKN KKYAISSHLR NDIAQLLRIG ERDRALHRAQ QLFLDENLMS LYHLLLHFSD IILLNLSYIR RRRDLPDGIN
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:TAIR;Acc:AT2G14830]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.