Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- mitochondrion 4
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G79910.1 | KRG97837 | AT2G39760.1 | 21798944 |
| AT1G79910.1 | KRH31032 | AT2G39760.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06586 | Soybean | cytosol | 16.93 | 52.46 |
| CDX87282 | Canola | cytosol | 46.56 | 43.56 |
| GSMUA_Achr5P23530_001 | Banana | nucleus | 39.15 | 41.34 |
| KRH23458 | Soybean | mitochondrion | 83.6 | 39.6 |
| KRH44367 | Soybean | mitochondrion | 65.61 | 38.51 |
| Bra035204.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.22 | 34.1 |
| KRH47048 | Soybean | mitochondrion | 64.02 | 31.68 |
| Solyc06g066690.2.1 | Tomato | nucleus | 46.03 | 28.16 |
| PGSC0003DMT400042551 | Potato | nucleus | 46.03 | 28.16 |
| Bra008502.1-P | Field mustard | nucleus | 53.44 | 26.65 |
| CDY37561 | Canola | nucleus | 52.91 | 26.53 |
| CDY41108 | Canola | nucleus | 52.91 | 26.45 |
| AT1G79910.1 | Thale cress | nucleus | 51.32 | 25.46 |
| Solyc03g120120.2.1 | Tomato | nucleus | 51.85 | 20.59 |
| KRH26063 | Soybean | cytosol | 22.75 | 20.57 |
| VIT_09s0002g04580.t01 | Wine grape | nucleus | 53.97 | 20.36 |
| KRH55350 | Soybean | extracellular | 21.69 | 20.1 |
| PGSC0003DMT400014529 | Potato | nucleus | 44.44 | 18.67 |
| Solyc12g043150.1.1 | Tomato | nucleus | 49.74 | 18.43 |
| KRG90825 | Soybean | mitochondrion | 30.16 | 17.59 |
| KRH35947 | Soybean | mitochondrion | 30.16 | 17.59 |
| GSMUA_Achr6P29590_001 | Banana | cytosol | 37.57 | 15.5 |
| KRH35011 | Soybean | mitochondrion | 31.75 | 15.42 |
| KRH69704 | Soybean | mitochondrion | 32.28 | 13.93 |
| KRH07948 | Soybean | mitochondrion | 32.28 | 13.83 |
| KRH45249 | Soybean | mitochondrion | 28.57 | 13.64 |
| KRH75395 | Soybean | mitochondrion | 28.04 | 13.15 |
| PGSC0003DMT400092826 | Potato | nucleus | 28.04 | 12.47 |
| KRH46919 | Soybean | mitochondrion | 26.98 | 12.44 |
| KRH08570 | Soybean | nucleus | 34.39 | 12.31 |
| KRH70215 | Soybean | nucleus | 34.39 | 12.1 |
| KRH01764 | Soybean | mitochondrion | 27.51 | 11.76 |
| KRH39280 | Soybean | mitochondrion, nucleus | 45.5 | 11.7 |
| TraesCS6B01G161300.1 | Wheat | cytosol, nucleus, plastid | 43.92 | 11.64 |
| KRH48400 | Soybean | mitochondrion, nucleus | 44.97 | 11.56 |
| TraesCS6D01G122600.1 | Wheat | cytosol, nucleus, plastid | 43.39 | 11.47 |
| Os02t0159200-01 | Rice | nucleus | 40.74 | 11.41 |
| GSMUA_Achr9P11280_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 40.21 | 11.29 |
| TraesCS6A01G133000.1 | Wheat | cytosol, nucleus, plastid | 42.33 | 11.19 |
| HORVU6Hr1G025460.3 | Barley | nucleus | 43.39 | 11.14 |
| EES04550 | Sorghum | nucleus | 40.21 | 11.13 |
| KRH70127 | Soybean | mitochondrion, nucleus | 22.22 | 11.05 |
| TraesCS7A01G445700.1 | Wheat | cytosol, mitochondrion, nucleus | 41.27 | 11.0 |
| Os06t0687000-00 | Rice | mitochondrion | 42.33 | 10.97 |
| Zm00001d053852_P001 | Maize | nucleus | 39.68 | 10.95 |
| TraesCS7B01G345200.1 | Wheat | cytosol, nucleus, plastid | 41.8 | 10.87 |
| GSMUA_Achr8P15690_001 | Banana | mitochondrion | 38.1 | 10.75 |
| TraesCS7D01G433700.1 | Wheat | cytosol, mitochondrion, nucleus | 41.27 | 10.74 |
| HORVU7Hr1G101130.3 | Barley | cytosol, nucleus | 41.27 | 10.74 |
| KRH60286 | Soybean | nucleus | 42.86 | 10.57 |
| KXG20673 | Sorghum | cytosol, nucleus, plastid | 41.27 | 9.94 |
| KRH41578 | Soybean | nucleus | 41.8 | 9.9 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 30.16 | 9.81 |
| Zm00001d014521_P001 | Maize | mitochondrion | 39.15 | 9.6 |
| KRH26928 | Soybean | nucleus | 29.63 | 8.45 |
| KRH22410 | Soybean | mitochondrion, nucleus | 29.63 | 8.41 |
| KRH41442 | Soybean | cytosol | 16.93 | 7.17 |
| KRH74171 | Soybean | mitochondrion | 31.22 | 5.55 |
| KRH49036 | Soybean | mitochondrion | 30.16 | 5.41 |
| Zm00001d036913_P001 | Maize | cytosol | 16.4 | 5.07 |
| Zm00001d051744_P001 | Maize | nucleus | 5.82 | 2.19 |
Protein Annotations
| EMBL:ACUP02012214 | EnsemblPlants:KRG89505 | EnsemblPlantsGene:GLYMA_20G027300 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF14 | PFAM:PF03398 | ProteinID:KRG89505 |
| ProteinID:KRG89505.1 | UniParc:UPI0006EE0CD7 | UniProt:A0A0R0EGK9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr20:+:3048090..3049518
Molecular Weight (calculated)
22250.3 Da
IEP (calculated)
8.478
GRAVY (calculated)
-0.358
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDALFKPKF YSKCISRLKL IKMRLEMIRN RRNAVQKFLK KDIADLLRSA LDYNAYERAE GLLLEQEMIC CYELIGKFVT CMSSDHIRNL CKQRDCPVEC
101: KEAIQSLIHA AARFSDLPEL RELRTLFTGK FGNSLELYIS KEFVEKLRQD LPSKEMKIQL LHDVAQEFSI EWNSKALEQR LQSPPQLHE
101: KEAIQSLIHA AARFSDLPEL RELRTLFTGK FGNSLELYIS KEFVEKLRQD LPSKEMKIQL LHDVAQEFSI EWNSKALEQR LQSPPQLHE
001: MFDGLFKPKF YTKCKSLVKI TKTRVDTVKR KKNSVCKYLK NDIVDLLKNS LDYNAYGRAE GLIEEKRRLA CYEFLEQFCN CVASNVSLLQ KSIRCPDECR
101: EAISSLVYAA ARVSEVPELR DLRSLFAERY GNTLDQFVNP EFVERFKAEP PSKEMKVELL QEIAREYSIK WDAKSLEQRL YTPPHHHHVH TETEEPKTEK
201: TNSEPEKTME KRSSLSFHGR EDSMDDSNKS IMSTSEEDSM STSGSCMTGP EDDPEMKPFY YRFMTPAPYT KPKIEKQESL PEKMTTSHLM DTESPTGGKP
301: KPRSVRRRFA NPPPEAETEG EALKLKVESK NMMRASESMG KASGEGFRRM SRRTASWQHK PSSCVPDFDE VAARVDALSR Y
101: EAISSLVYAA ARVSEVPELR DLRSLFAERY GNTLDQFVNP EFVERFKAEP PSKEMKVELL QEIAREYSIK WDAKSLEQRL YTPPHHHHVH TETEEPKTEK
201: TNSEPEKTME KRSSLSFHGR EDSMDDSNKS IMSTSEEDSM STSGSCMTGP EDDPEMKPFY YRFMTPAPYT KPKIEKQESL PEKMTTSHLM DTESPTGGKP
301: KPRSVRRRFA NPPPEAETEG EALKLKVESK NMMRASESMG KASGEGFRRM SRRTASWQHK PSSCVPDFDE VAARVDALSR Y
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8L402]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.