Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G345200.1 Wheat cytosol, nucleus, plastid 95.63 93.26
TraesCS7D01G433700.1 Wheat cytosol, mitochondrion, nucleus 92.52 90.36
HORVU7Hr1G101130.3 Barley cytosol, nucleus 90.41 88.29
Os06t0687000-00 Rice mitochondrion 58.53 56.93
KRH06586 Soybean cytosol 4.51 52.46
GSMUA_Achr5P23530_001 Banana nucleus 13.12 51.96
KXG20673 Sorghum cytosol, nucleus, plastid 55.71 50.32
Zm00001d014521_P001 Maize mitochondrion 53.31 49.03
TraesCS6A01G133000.1 Wheat cytosol, nucleus, plastid 44.15 43.78
KRG89505 Soybean mitochondrion 11.0 41.27
CDX87282 Canola cytosol 10.72 37.62
GSMUA_Achr6P29590_001 Banana cytosol 23.98 37.12
Zm00001d051744_P001 Maize nucleus 25.95 36.65
Zm00001d036913_P001 Maize cytosol 29.9 34.7
KRH44367 Soybean mitochondrion 14.95 32.92
PGSC0003DMT400042551 Potato nucleus 14.1 32.36
VIT_09s0002g04580.t01 Wine grape nucleus 22.85 32.34
CDY37561 Canola nucleus 17.07 32.1
CDY52976 Canola mitochondrion 13.96 32.04
KRH47048 Soybean mitochondrion 17.21 31.94
Bra008502.1-P Field mustard nucleus 17.07 31.93
Solyc06g066690.2.1 Tomato nucleus 13.82 31.72
CDY41108 Canola nucleus 16.78 31.48
CDX87899 Canola nucleus 12.13 31.16
CDY49898 Canola mitochondrion 11.99 31.02
AT1G79910.1 Thale cress nucleus 16.36 30.45
KRH23458 Soybean mitochondrion 17.07 30.33
GSMUA_Achr9P11280_001 Banana cytosol, mitochondrion, nucleus, plastid 28.63 30.16
CDX87900 Canola mitochondrion 11.99 29.51
Bra035204.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 7.19 29.48
CDY49897 Canola nucleus 11.14 29.48
GSMUA_Achr8P15690_001 Banana mitochondrion 27.64 29.25
Solyc03g120120.2.1 Tomato nucleus 19.18 28.57
Bra018962.1-P Field mustard extracellular, vacuole 14.1 28.09
PGSC0003DMT400014529 Potato nucleus 17.77 28.0
AT1G52315.1 Thale cress mitochondrion 13.68 27.95
Solyc12g043150.1.1 Tomato nucleus 19.46 27.06
TraesCS4A01G084900.2 Wheat mitochondrion 6.77 26.52
PGSC0003DMT400092826 Potato nucleus 14.53 24.24
VIT_11s0016g04010.t01 Wine grape nucleus 24.54 23.97
CDX68838 Canola nucleus 21.02 23.65
KRH39280 Soybean mitochondrion, nucleus 24.4 23.54
CDX75238 Canola nucleus 20.87 23.45
KRH48400 Soybean mitochondrion, nucleus 24.12 23.27
KRH60286 Soybean nucleus 23.13 21.41
KRH41578 Soybean nucleus 23.13 20.55
AT4G32350.1 Thale cress nucleus 21.02 20.36
PGSC0003DMT400022180 Potato nucleus 15.66 20.11
TraesCS3A01G263500.1 Wheat mitochondrion, plastid 9.03 20.06
Solyc07g022860.2.1 Tomato nucleus 15.51 19.96
TraesCS4A01G084800.1 Wheat mitochondrion 7.05 17.73
Bra030391.1-P Field mustard nucleus 11.71 16.6
TraesCS4A01G269300.1 Wheat mitochondrion 7.62 15.25
TraesCS5A01G346800.1 Wheat plastid 10.3 15.05
TraesCS3A01G459100.1 Wheat cytosol, plastid 10.3 14.2
TraesCS4A01G085000.1 Wheat mitochondrion, plastid 9.73 12.9
TraesCS3A01G252800.1 Wheat cytosol 12.13 7.69
Protein Annotations
EnsemblPlants:TraesCS7A01G445700.1EnsemblPlantsGene:TraesCS7A01G445700Gene3D:1.20.1260.60GO:GO:0006810GO:GO:0008150GO:GO:0015031
InterPro:Ist1ncoils:CoilPANTHER:PTHR12161PANTHER:PTHR12161:SF40PFAM:PF03398SEG:seg
MapMan:35.2:::::
Description
No Description!
Coordinates
chr7A:+:640576923..640580609
Molecular Weight (calculated)
79402.0 Da
IEP (calculated)
8.672
GRAVY (calculated)
-0.934
Length
709 amino acids
Sequence
(BLAST)
001: MFDGLINSKF YNRCKHAFKC TRTRLVVIRR KKQAMIGFLK KDVADLLING LDIHAFGRMD ALIMEMNHAS CYDMIEQCCD FLGKQLNSLQ KQRDCPQESM
101: EAVSTLIFAT ARFPDLPELC DLRHIFTERY GGSLEPFVSL EFIWKLESEL FTNEEKFQVM ESIAEESSVG FDMRALEIKL WAARESEDDL LEKDSMNKDE
201: PAVPLPIKQK DDGRLNDNTG RKNYDKSHGK EQLEKSVSPL DLKREKAQKD DNTRRRHADK ADGKEHLEKS VSPLQTEREE AQRRVQKLKK KDLRPSEKEL
301: MEAVELDING LPKQGSGLVK FPETESNRIV PPIVKPKETK KELGVEKENN RGLGYHHRSP IPGRPDYTRR HANLGCKALG LQNQGPTSLS PTSGKTTNRP
401: SPVSNPNGAK GRNCDEKEEG NSCLRGRPQH LEDLGHTVQN GQRAPHRVAN VQPPYVKPKL GMQPVKDDPA KPIDSNCNMS ERTDRLVDKD VLRPVSVRRR
501: PAAPAFDEAP NGEKVTSQKG NSHRIQPSKH KGATDGYDRK GNGVGNGRNV ERTPSGRPSH SGMRNGVLYD DDYDGSMQQP KAGEAEAIDF GNLLPRAANG
601: HHRLNSRNTD VHGGDPDEEE RMMDKLLMHY SKKGSGTDET KTTVETSRTA NCHGRAVSLP HESVSPGEAA KVPARSTSMR SDCPGGVRVH PKMPDFEELA
701: ARVMALRNA
Best Arabidopsis Sequence Match ( AT4G32350.3 )
(BLAST)
001: MFDGFLGRGF APKGKPLIKL TKNRIDVLRR KRNATIKFLK RDLADLIING HDYNAFSRAG GLLDELRYLW SLDFVEQTCD FVYKQLSTMQ KTPECPEDCR
101: EAISSLMFAA SGFSELPELR ELRQMFHEKY TDSLALFVNQ ELVENMSSKP FSMEKKVKLM EDVALEFSIR WDSKDFEKRI VRQNSISVME TPKSTNDKYK
201: PVDRNMALPK REEFEGSENG VSLNRKTAEA SERRDPLFQS DKESYQNGLR GNQRGLTYKE RSENVLHASR SESKDNKAER KEFYLHSKQN PAREKHQPIF
301: NEGDTIVMKV NYGNLGQGNG HRPGVVDAHK KTEFVASERK EFYSQSKQEP SRERHQPIFN DGDTIVMKVK HENHVQGNGH KNGVVDLHKK IEVNASEKLK
401: SSSSKRADKL VIGFKQESFF QGYKHEKNEE HAHQKVEDST SRPPKPNSKS KRAESINPGS RHHNDRESKE NAVLVGKSTE EDPSGDNVKG GEYEYDHANP
501: ARKVEERETE RMKSPFYKSL PPPYVKKSIA KARHEKAEAL DNPKARFDGE EGNHPDNGKN VYGAERRNGA GHHEVNDIDN ASLKRQTNRR KHIVESGGDD
601: HISSRRRENS RKGLQVLIDE DEKDSEEKMM DKLLMHYSKK PSSYEKDNVQ EESKSRRTHL KKGESDEEMM IHQPARSRSL PAEQLAGPSE PAKTFARAAS
701: FQPERSSEAK HVHPKLPNYD DLAARFAELK GR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8RXT2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.