Factsheet for TraesCS3A01G263500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	98.12	98.12
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	97.18	97.18
HORVU3Hr1G063860.1	Barley	plastid	94.04	82.64
Os01t0687700-01	Rice	mitochondrion, plasma membrane	82.13	82.13
Zm00001d052541_P001	Maize	extracellular	36.68	81.25
Zm00001d043813_P001	Maize	mitochondrion	81.19	80.69
KXG33152	Sorghum	mitochondrion	81.19	80.69
KXG19452	Sorghum	mitochondrion	60.19	69.82
GSMUA_Achr9P21370_001	Banana	mitochondrion	63.32	61.77
GSMUA_Achr3P29510_001	Banana	mitochondrion	62.7	61.35
KRG90825	Soybean	mitochondrion	59.56	58.64
KRH35947	Soybean	mitochondrion	58.93	58.02
Solyc04g007230.2.1	Tomato	mitochondrion	57.37	56.66
VIT_01s0011g03610.t01	Wine grape	mitochondrion	56.74	55.02
Bra012478.1-P	Field mustard	mitochondrion	52.98	52.32
CDY58595	Canola	mitochondrion	52.98	52.32
CDY53122	Canola	mitochondrion	52.04	51.39
AT1G25420.1	Thale cress	mitochondrion	52.04	51.39
TraesCS4A01G084900.2	Wheat	mitochondrion	19.44	34.25
TraesCS3A01G459100.1	Wheat	cytosol, plastid	46.08	28.6
TraesCS5A01G346800.1	Wheat	plastid	39.5	25.98
TraesCS4A01G269300.1	Wheat	mitochondrion	26.02	23.45
TraesCS4A01G084800.1	Wheat	mitochondrion	20.69	23.4
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	23.51	14.02
TraesCS3A01G252800.1	Wheat	cytosol	35.42	10.11
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	20.06	9.03
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	19.75	8.81

Protein Annotations

EnsemblPlants:TraesCS3A01G263500.1	EnsemblPlantsGene:TraesCS3A01G263500	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr3A:+:487436636..487439406

Molecular Weight (calculated)

35146.0 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.348

Length

319 amino acids

Sequence
(BLAST)

001: MSSLNSLFNR SSPFGTKCKT CLNLIISRIK LLRNRREMQL INMRKEMVQY LQTGQESIAR IRVEHIIREQ NILAAYEIVE LFCEFVLARV PIVEAQKECP
101: IELREAIASI IFASGRCSDL PELMHLRNLF TTKYGKEFVA AAMELRPDCG VNRTIIEKLS VKAPSAESKL KVLKAIAHEY NLDWDSSNTE AEFNKKYEDL
201: LDDSGSSVRQ VQTPTTESSP ASSISKDKPS ILPVNDTSKN KTPESPKSPA VSSRAYAATK GNVDSQEHQP PAAERSSYAG PGSSDVLEKA RAAIAAATRA
301: SAAARAAAEL VNKVKVTTQ

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.