Factsheet for Os01t0687700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	83.7	83.7
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	83.07	83.07
Zm00001d052541_P001	Maize	extracellular	37.3	82.64
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	82.13	82.13
Zm00001d043813_P001	Maize	mitochondrion	81.82	81.31
KXG33152	Sorghum	mitochondrion	81.82	81.31
HORVU3Hr1G063860.1	Barley	plastid	81.82	71.9
KXG19452	Sorghum	mitochondrion	60.5	70.18
GSMUA_Achr3P29510_001	Banana	mitochondrion	64.26	62.88
GSMUA_Achr9P21370_001	Banana	mitochondrion	63.95	62.39
Solyc04g007230.2.1	Tomato	mitochondrion	57.99	57.28
KRG90825	Soybean	mitochondrion	57.99	57.1
KRH35947	Soybean	mitochondrion	57.99	57.1
VIT_01s0011g03610.t01	Wine grape	mitochondrion	57.05	55.32
Bra012478.1-P	Field mustard	mitochondrion	52.04	51.39
CDY58595	Canola	mitochondrion	52.04	51.39
AT1G25420.1	Thale cress	mitochondrion	51.72	51.08
CDY53122	Canola	mitochondrion	51.41	50.77
Os03t0257500-01	Rice	mitochondrion	18.5	30.57
Os09t0547200-01	Rice	mitochondrion	39.81	26.68
Os08t0175200-01	Rice	nucleus	44.83	25.49
Os03t0710000-01	Rice	plasma membrane	26.65	23.94
Os03t0257600-01	Rice	mitochondrion	23.2	13.7
Os01t0706400-01	Rice	plasma membrane	38.56	11.17
Os02t0159200-01	Rice	nucleus	18.81	8.89
Os06t0687000-00	Rice	mitochondrion	18.18	7.96

Protein Annotations

EMBL:AK061158	EMBL:AK073996	EnsemblPlants:Os01t0687700-01	EnsemblPlantsGene:Os01g0687700	EntrezGene:4327935	Gene3D:1.20.1260.60
GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161
PANTHER:PTHR12161:SF28	PFAM:PF03398	ProteinID:BAD82544.1	ProteinID:BAF05829.1	ProteinID:BAS73768.1	RefSeq:XP_015621361.1
SEG:seg	UniParc:UPI000049EA96	UniProt:Q5N7L3	MapMan:35.2	:	:

Description

Protein of unknown function DUF292, eukaryotic domain containing protein. (Os01t0687700-01)

Coordinates

chr1:-:28370919..28374507

Molecular Weight (calculated)

34968.0 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.181

Length

319 amino acids

Sequence
(BLAST)

001: MSSLNSLFNR STFGTKCKTC LNLVISRIKL LRNRRELQLI NMRKEMVQYL QTGQESIARI RVEHIIREQN ILAAYEIVEL FCEFVLARVP IVEVQKECPF
101: ELREAIASII FASGRCSDLP ELMHLRTLFT TKYGKEFVAA AMELRPDSGV NRTIIEKLSV KAPSAESKLK VLKAIAQEYG LEWDSSNTEA ELNKKYEDLL
201: DGSGSSARQG QLPIIENSPV ASISRDMPSL SISPVEDTGK YQAAPQSPSS PAGSAVMHAA TKSNMVSQEH HRSPADEISC ATPSSSDVLE KARAAIAAAN
301: RASAAARAAA DLVKVKITS

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.