Factsheet for TraesCS3D01G263400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	98.12	98.12
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	98.12	98.12
HORVU3Hr1G063860.1	Barley	plastid	95.61	84.02
Os01t0687700-01	Rice	mitochondrion, plasma membrane	83.7	83.7
Zm00001d052541_P001	Maize	extracellular	36.68	81.25
KXG33152	Sorghum	mitochondrion	81.5	81.0
Zm00001d043813_P001	Maize	mitochondrion	81.5	81.0
KXG19452	Sorghum	mitochondrion	60.19	69.82
GSMUA_Achr9P21370_001	Banana	mitochondrion	64.26	62.69
GSMUA_Achr3P29510_001	Banana	mitochondrion	63.32	61.96
KRG90825	Soybean	mitochondrion	59.56	58.64
KRH35947	Soybean	mitochondrion	58.93	58.02
Solyc04g007230.2.1	Tomato	mitochondrion	57.37	56.66
VIT_01s0011g03610.t01	Wine grape	mitochondrion	57.05	55.32
CDY58595	Canola	mitochondrion	52.98	52.32
Bra012478.1-P	Field mustard	mitochondrion	52.98	52.32
AT1G25420.1	Thale cress	mitochondrion	52.04	51.39
CDY53122	Canola	mitochondrion	52.04	51.39
TraesCS4D01G219500.2	Wheat	mitochondrion	20.06	34.78
TraesCS3D01G451700.1	Wheat	cytosol	46.4	28.91
TraesCS5D01G353300.1	Wheat	mitochondrion	39.81	26.35
TraesCS4D01G044800.1	Wheat	mitochondrion	26.33	24.28
TraesCS4D01G044400.1	Wheat	mitochondrion	26.02	23.58
TraesCS4D01G219800.1	Wheat	mitochondrion	20.69	23.49
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	23.2	13.7
TraesCS3D01G253500.1	Wheat	nucleus	37.93	10.83
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	20.38	8.95
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	20.06	8.95

Protein Annotations

EnsemblPlants:TraesCS3D01G263400.1	EnsemblPlantsGene:TraesCS3D01G263400	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr3D:+:365518691..365521652

Molecular Weight (calculated)

35070.0 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.320

Length

319 amino acids

Sequence
(BLAST)

001: MSSLNSLFNR SSPFGTKCKT CLNLIISRIK LLRNRREMQL INMRKEMVQY LQTGQESIAR IRVEHIIREQ NILAAYEIVE LFCEFVLARV PIVEAQKECP
101: IELREAIASI IFASGRCSDL PELMHLRNLF TTKYGKEFVA AAMELRPDCG VNRTIIEKLS VKAPSAESKL KVLKAIAHEY NLDWDSSNTE AEFNKKYEDL
201: LDDSGSSVRQ GQTPTIESSP ASSISRDKPS ILPVNDTSKN KTPESPKSPA VSSRAYAATK SNVASQEHQP PAAERSSCAG PGSSDVLEKA RAAIAAATRA
301: SAAARAAAEL VNKVKVTTQ

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.