CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052541_P001	Maize	extracellular	41.09	78.47
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	70.18	60.5
Os01t0687700-01	Rice	mitochondrion, plasma membrane	70.18	60.5
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	69.82	60.19
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	69.82	60.19
KXG33152	Sorghum	mitochondrion	70.18	60.12
HORVU3Hr1G063860.1	Barley	plastid	69.45	52.62
GSMUA_Achr9P21370_001	Banana	mitochondrion	57.09	48.01
GSMUA_Achr3P29510_001	Banana	mitochondrion	56.36	47.55
KRG90825	Soybean	mitochondrion	54.55	46.3
KRH35947	Soybean	mitochondrion	54.18	45.99
Solyc04g007230.2.1	Tomato	mitochondrion	53.82	45.82
VIT_01s0011g03610.t01	Wine grape	mitochondrion	53.09	44.38
CDY58595	Canola	mitochondrion	51.64	43.96
Bra012478.1-P	Field mustard	mitochondrion	51.64	43.96
CDY53122	Canola	mitochondrion	51.27	43.65
AT1G25420.1	Thale cress	mitochondrion	49.82	42.41
EER92528	Sorghum	mitochondrion	21.45	31.72
OQU90964	Sorghum	mitochondrion	16.36	26.95
KXG24567	Sorghum	cytosol, plastid	44.0	23.45
EER99304	Sorghum	plastid	40.36	23.12
EER93588	Sorghum	mitochondrion	26.91	21.64
EER92527	Sorghum	mitochondrion, plastid	23.64	12.13
EES04550	Sorghum	nucleus	21.82	8.78
EES03498	Sorghum	nucleus, plastid	35.64	7.92
KXG20673	Sorghum	cytosol, nucleus, plastid	19.64	6.88

Protein Annotations

EnsemblPlants:KXG19452	EnsemblPlantsGene:SORBI_3010G061100	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	ProteinID:KXG19452	ProteinID:KXG19452.1
SEG:seg	UniParc:UPI0007F1BCBA	UniProt:A0A194YHK8	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr10:-:4798599..4801816

Molecular Weight (calculated)

31515.6 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.529

Length

275 amino acids

Sequence
(BLAST)

001: MSSLNSLFNR STFGLRHKMQ NMFTSRHFED QELLRNRREL QLINMRKEMV QYLQTGQESI ARIRVEHIIR EQNILASYEI VELFCEFVLA RVPIVEVQKE
101: CPLELREAIA SIIFASGRCS DLPELMHLRN LFTTKYGKEF VAGAMELRPD SGVNHTIIKK LSVKAPSGES KLKVLKAIAQ EYNIEWDSSN TEAEFNKKYE
201: DLLVPWRSLQ VRVCTSPEAL DCSHHRMRRC RRMRAGARSP EEGDEADDDA AGGGESDSAQ ELQTASMDRE AGDPY

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.