Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012478.1-P | Field mustard | mitochondrion | 87.93 | 87.93 |
| CDY53122 | Canola | mitochondrion | 87.93 | 87.93 |
| CDY58595 | Canola | mitochondrion | 87.93 | 87.93 |
| Zm00001d052541_P001 | Maize | extracellular | 28.48 | 63.89 |
| KRG90825 | Soybean | mitochondrion | 63.16 | 62.96 |
| KRH35947 | Soybean | mitochondrion | 61.61 | 61.42 |
| VIT_01s0011g03610.t01 | Wine grape | mitochondrion | 62.23 | 61.09 |
| Solyc04g007230.2.1 | Tomato | mitochondrion | 56.66 | 56.66 |
| TraesCS3D01G263400.1 | Wheat | mitochondrion, plastid | 51.39 | 52.04 |
| TraesCS3A01G263500.1 | Wheat | mitochondrion, plastid | 51.39 | 52.04 |
| TraesCS3B01G296700.1 | Wheat | mitochondrion, plastid | 51.08 | 51.72 |
| Os01t0687700-01 | Rice | mitochondrion, plasma membrane | 51.08 | 51.72 |
| Zm00001d043813_P001 | Maize | mitochondrion | 51.08 | 51.4 |
| KXG33152 | Sorghum | mitochondrion | 51.08 | 51.4 |
| GSMUA_Achr3P29510_001 | Banana | mitochondrion | 51.39 | 50.92 |
| GSMUA_Achr9P21370_001 | Banana | mitochondrion | 51.08 | 50.46 |
| KXG19452 | Sorghum | mitochondrion | 42.41 | 49.82 |
| HORVU3Hr1G063860.1 | Barley | plastid | 50.77 | 45.18 |
| AT4G35730.1 | Thale cress | plastid | 37.15 | 25.75 |
| AT1G34220.1 | Thale cress | nucleus | 43.34 | 21.57 |
| AT1G13340.1 | Thale cress | mitochondrion | 23.84 | 18.83 |
| AT3G15490.1 | Thale cress | mitochondrion, nucleus | 12.07 | 18.48 |
| AT2G14830.1 | Thale cress | mitochondrion | 20.12 | 16.93 |
| AT1G79910.1 | Thale cress | nucleus | 19.81 | 16.8 |
| AT1G52315.1 | Thale cress | mitochondrion | 17.34 | 16.14 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 34.06 | 11.74 |
| AT4G29440.1 | Thale cress | mitochondrion | 31.89 | 9.45 |
| AT4G32350.1 | Thale cress | nucleus | 17.03 | 7.51 |
| AT1G51900.1 | Thale cress | mitochondrion | 17.65 | 7.36 |
Protein Annotations
| Gene3D:1.20.1260.60 | MapMan:35.2 | EntrezGene:839128 | ProteinID:AAG50817.1 | ProteinID:AEE30620.1 | ProteinID:ANM58123.1 |
| ArrayExpress:AT1G25420 | EnsemblPlantsGene:AT1G25420 | RefSeq:AT1G25420 | TAIR:AT1G25420 | RefSeq:AT1G25420-TAIR-G | EnsemblPlants:AT1G25420.1 |
| TAIR:AT1G25420.1 | EMBL:AY095990 | EMBL:AY143866 | Unigene:At.43165 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | RefSeq:NP_001320581.1 | RefSeq:NP_564235.1 | PFAM:PF03398 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12161 |
| PANTHER:PTHR12161:SF28 | UniProt:Q9C6L2 | UniParc:UPI00000AC544 | SEG:seg | : | : |
Description
At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
Coordinates
chr1:+:8915915..8918267
Molecular Weight (calculated)
35815.3 Da
IEP (calculated)
9.395
GRAVY (calculated)
-0.305
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.