Factsheet for GSMUA_Achr9P21370_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29510_001	Banana	mitochondrion	77.06	77.3
Zm00001d052541_P001	Maize	extracellular	30.89	70.14
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	62.69	64.26
KXG33152	Sorghum	mitochondrion	63.0	64.17
Os01t0687700-01	Rice	mitochondrion, plasma membrane	62.39	63.95
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	61.77	63.32
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	61.77	63.32
Zm00001d043813_P001	Maize	mitochondrion	61.47	62.62
VIT_01s0011g03610.t01	Wine grape	mitochondrion	59.02	58.66
KRG90825	Soybean	mitochondrion	57.19	57.72
KRH35947	Soybean	mitochondrion	56.57	57.1
KXG19452	Sorghum	mitochondrion	48.01	57.09
HORVU3Hr1G063860.1	Barley	plastid	61.77	55.65
Solyc04g007230.2.1	Tomato	mitochondrion	54.43	55.11
AT1G25420.1	Thale cress	mitochondrion	50.46	51.08
Bra012478.1-P	Field mustard	mitochondrion	50.15	50.77
CDY58595	Canola	mitochondrion	50.15	50.77
CDY53122	Canola	mitochondrion	49.54	50.15
GSMUA_Achr5P23530_001	Banana	nucleus	16.51	30.17
GSMUA_Achr5P23420_001	Banana	mitochondrion	42.2	28.16
GSMUA_Achr3P26880_001	Banana	mitochondrion	33.95	25.69
GSMUA_Achr6P02830_001	Banana	cytosol	44.95	25.0
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	25.38	19.48
GSMUA_Achr10P...	Banana	mitochondrion	27.22	18.39
GSMUA_Achr6P24100_001	Banana	mitochondrion	26.3	17.59
GSMUA_Achr6P29590_001	Banana	cytosol	18.04	12.88
GSMUA_Achr1P14380_001	Banana	nucleus	36.39	9.56
GSMUA_Achr8P15690_001	Banana	mitochondrion	19.57	9.55
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.65	9.06

Protein Annotations

EnsemblPlants:GSMUA_Achr9P21370_001	EnsemblPlants:GSMUA_Achr9T21370_001	EnsemblPlantsGene:GSMUA_Achr9G21370_001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	SEG:seg
UniParc:UPI000294E97B	UniProt:M0U296	MapMan:35.2	:	:	:

Description

DUF292 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G21370_001]

Coordinates

chr9:+:26458941..26474260

Molecular Weight (calculated)

36205.2 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.325

Length

327 amino acids

Sequence
(BLAST)

001: MSTLNSIFNR ASFGTRCKTC LNLAISRIKL LRNKRELQLK HMRKEISQYI QTGQEAIARI RVENIIREQN ILAAYEIIEL FCEFVLARVL ILETQRACPV
101: ELQEAVASII FASPRCSDLP ELLHIRNLFF TKYGKEFAAA ASELRPESNV NRMIIEKLTV TAPPAELKVK VLKAIAQEYN LEWDSSDTES ELNKKHEDLL
201: DGLNHMELQA PVIESSTNPS PRDGVFVSSD KGKPDQLPQS PTPSINSPSL LTNKTSSTVA DKEDAATSET EAPSVNHRSC SRSSSDVLEK ARAAIASADR
301: ASAAARTAAE LVKVKLPHQS GNFSQCN

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.