Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028142_P001 | Maize | cytosol | 4.98 | 62.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 4.9 | 61.0 |
| CDY04642 | Canola | cytosol | 6.67 | 55.33 |
| GSMUA_Achr3P29510_001 | Banana | mitochondrion | 10.2 | 38.96 |
| GSMUA_Achr3P26880_001 | Banana | mitochondrion | 13.01 | 37.5 |
| GSMUA_Achr9P21370_001 | Banana | mitochondrion | 9.56 | 36.39 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.47 | 35.28 |
| GSMUA_Achr5P23530_001 | Banana | nucleus | 4.58 | 31.84 |
| KRH49036 | Soybean | mitochondrion | 25.3 | 29.91 |
| GSMUA_Achr5P23420_001 | Banana | mitochondrion | 11.65 | 29.59 |
| KRH74171 | Soybean | mitochondrion | 24.9 | 29.14 |
| KRH41442 | Soybean | cytosol | 10.12 | 28.25 |
| GSMUA_Achr6P02830_001 | Banana | cytosol | 12.93 | 27.38 |
| CDY35879 | Canola | mitochondrion | 19.76 | 26.83 |
| Bra039012.1-P | Field mustard | mitochondrion | 19.76 | 26.83 |
| CDX82713 | Canola | mitochondrion | 19.76 | 26.77 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 19.6 | 26.04 |
| Bra011109.1-P | Field mustard | mitochondrion | 18.63 | 25.22 |
| GSMUA_Achr6P07700_001 | Banana | cytosol, mitochondrion, nucleus | 8.59 | 25.12 |
| Os01t0706400-01 | Rice | plasma membrane | 22.17 | 25.07 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 22.33 | 25.02 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 22.41 | 24.98 |
| CDY43502 | Canola | mitochondrion | 18.71 | 24.92 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 21.77 | 24.24 |
| Solyc07g032230.2.1 | Tomato | nucleus | 20.8 | 24.14 |
| TraesCS3B01G288900.2 | Wheat | plastid | 22.25 | 24.05 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 20.8 | 23.87 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 22.65 | 23.84 |
| GSMUA_Achr6P24100_001 | Banana | mitochondrion | 9.16 | 23.31 |
| EES03498 | Sorghum | nucleus, plastid | 22.41 | 22.55 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 21.77 | 22.38 |
| AT4G29440.1 | Thale cress | mitochondrion | 19.44 | 22.2 |
| GSMUA_Achr10P... | Banana | mitochondrion | 8.35 | 21.49 |
| GSMUA_Achr6P29590_001 | Banana | cytosol | 7.47 | 20.31 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 15.66 | 16.54 |
| GSMUA_Achr8P15690_001 | Banana | mitochondrion | 8.11 | 15.07 |
| GSMUA_Achr9P11280_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 7.79 | 14.41 |
Protein Annotations
| Gene3D:1.20.1260.60 | MapMan:35.2 | ncoils:Coil | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr1G14380_001 | EnsemblPlants:GSMUA_Achr1P14380_001 | EnsemblPlants:GSMUA_Achr1T14380_001 |
| InterPro:Ist1 | UniProt:M0RZU6 | PFAM:PF03398 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | TMHMM:TMhelix |
| UniParc:UPI000295E92F | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G14380_001]
Coordinates
chr1:+:10937713..10944477
Molecular Weight (calculated)
139504.0 Da
IEP (calculated)
6.645
GRAVY (calculated)
-0.852
Length
1245 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHAKSKISEL LPRSFKPVKC KTSLKLAVSR MKLLKNKREA SVRQMRRDLA QLLESGQEQT ARIRVEHVIR EEKTMAAYDL IQIYCELIES RLPIIESQKN
0101: CPIDLKEAIS SVIFASPRCA DIPELMDIRK QFQAKYGKDF VTAAIEVRPE CGVSRMMVEK LSAKAPDVQI KIKVLNEVAK EHDVKWDSKA FEEQVQKPKD
0201: DLLDGPSSFI AAEKMTIKSS DVKPSSVNSW DNESTIKVSH SRKASEPKET MPDLQEVKSA YVKGESASVH RSNWKMEFKD ATSAAEAAAE SAERASMAAR
0301: AAAELASRGS ISRQPSSGSY KSSAHVIKSE GPGSGKSSYL GSNYIVGRSV TEEDDKSQRL QFVKPKVQTP QKDDMVRTST FTEDTTLNSN HIAGDDLVSE
0401: KSQFSGSSFR DVVSEIDGRE SNAKSYDNSE KSFSDPESES KNLKNDENEN YDPRHNILAS SVYSNNFDDY TTTDDHANNT RGDISDVVYD NYDYDTDDHS
0501: FLKRHSEENM LDSFFQQPRE ESSSFSLNMD SFSNKEHTSG SLNNESRSQL HSWRESDRTD YSESTRKANL HSDSDDYLPP KFDSPKYDSE GPGSESEDEL
0601: EKSKHVTDMR PSSFLHTDTS SGKGSITSQP GNRTYLMDDT VEVDEGNGSS PPAVLPSAKK FEVEPSPNEE SWRSGLSVHK NQQTQRDSRS PNYNHIGTEE
0701: ELDERYGSGV LNFGRLTGGL RNRGYTRTPY LRNTSNDASP RLKTNSDDIS LTNEEEISFG MSRFSSIEVT NEEKPSKDVH AIAFRPKMRA SKANTDTDLE
0801: DGGQVANYDV GHKGSMSGGS LTSLNRTIDD TSEDFEDPVH ESYGRLQQRK EYRESILRSS YVNPSVDSKE EQISTAGNRQ RRDSSISTPK SQKLSIATSM
0901: EKSTVNHPNK TLLSSEVLDQ GLDNQKSRVK AYTETSSRMP INYSSIDDNE AEELAPRTTY VRGGSNDVKL SRRTKPTSPV VKEDKVPRTS DQFATSMVKE
1001: SKSSRLSSAT ESFSGTTKHT RDLDHRENSK PRLPHSSAEE TSPKHLLAES STGKRNPNVS QDERRQSSVK ENNEKPTSSS SSEKPTSRES SFKNASHVHP
1101: KLPDYDSIAA HFQSLRANVR QKGIGLGSMF YDAAPLHCLV AVGNFHSLWN GPVIFFQGCC PYLPYMSYSC IFYLVIQAVL FVPLFYRALI SPLLFYRQNK
1201: HTPPYKCWYL KHACLLLLSI CSSLRQIGKD EISKCLKVTN YMVNL
0101: CPIDLKEAIS SVIFASPRCA DIPELMDIRK QFQAKYGKDF VTAAIEVRPE CGVSRMMVEK LSAKAPDVQI KIKVLNEVAK EHDVKWDSKA FEEQVQKPKD
0201: DLLDGPSSFI AAEKMTIKSS DVKPSSVNSW DNESTIKVSH SRKASEPKET MPDLQEVKSA YVKGESASVH RSNWKMEFKD ATSAAEAAAE SAERASMAAR
0301: AAAELASRGS ISRQPSSGSY KSSAHVIKSE GPGSGKSSYL GSNYIVGRSV TEEDDKSQRL QFVKPKVQTP QKDDMVRTST FTEDTTLNSN HIAGDDLVSE
0401: KSQFSGSSFR DVVSEIDGRE SNAKSYDNSE KSFSDPESES KNLKNDENEN YDPRHNILAS SVYSNNFDDY TTTDDHANNT RGDISDVVYD NYDYDTDDHS
0501: FLKRHSEENM LDSFFQQPRE ESSSFSLNMD SFSNKEHTSG SLNNESRSQL HSWRESDRTD YSESTRKANL HSDSDDYLPP KFDSPKYDSE GPGSESEDEL
0601: EKSKHVTDMR PSSFLHTDTS SGKGSITSQP GNRTYLMDDT VEVDEGNGSS PPAVLPSAKK FEVEPSPNEE SWRSGLSVHK NQQTQRDSRS PNYNHIGTEE
0701: ELDERYGSGV LNFGRLTGGL RNRGYTRTPY LRNTSNDASP RLKTNSDDIS LTNEEEISFG MSRFSSIEVT NEEKPSKDVH AIAFRPKMRA SKANTDTDLE
0801: DGGQVANYDV GHKGSMSGGS LTSLNRTIDD TSEDFEDPVH ESYGRLQQRK EYRESILRSS YVNPSVDSKE EQISTAGNRQ RRDSSISTPK SQKLSIATSM
0901: EKSTVNHPNK TLLSSEVLDQ GLDNQKSRVK AYTETSSRMP INYSSIDDNE AEELAPRTTY VRGGSNDVKL SRRTKPTSPV VKEDKVPRTS DQFATSMVKE
1001: SKSSRLSSAT ESFSGTTKHT RDLDHRENSK PRLPHSSAEE TSPKHLLAES STGKRNPNVS QDERRQSSVK ENNEKPTSSS SSEKPTSRES SFKNASHVHP
1101: KLPDYDSIAA HFQSLRANVR QKGIGLGSMF YDAAPLHCLV AVGNFHSLWN GPVIFFQGCC PYLPYMSYSC IFYLVIQAVL FVPLFYRALI SPLLFYRQNK
1201: HTPPYKCWYL KHACLLLLSI CSSLRQIGKD EISKCLKVTN YMVNL
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.