Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028142_P001 | Maize | cytosol | 99.0 | 99.0 |
| CDY04642 | Canola | cytosol | 38.0 | 25.33 |
| Zm00001d043813_P001 | Maize | mitochondrion | 41.0 | 12.77 |
| Zm00001d034058_P004 | Maize | mitochondrion | 23.0 | 12.11 |
| Zm00001d021453_P002 | Maize | plastid | 57.0 | 10.9 |
| Zm00001d028457_P001 | Maize | mitochondrion | 21.0 | 10.5 |
| Zm00001d034057_P001 | Maize | mitochondrion | 23.0 | 10.04 |
| Zm00001d049479_P003 | Maize | cytosol, mitochondrion, plastid | 52.0 | 9.52 |
| Zm00001d024425_P003 | Maize | cytosol | 53.0 | 9.35 |
| Zm00001d047887_P001 | Maize | mitochondrion | 21.0 | 8.43 |
| Zm00001d047886_P001 | Maize | mitochondrion | 21.0 | 8.4 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 98.0 | 8.09 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 47.0 | 8.09 |
| Zm00001d047885_P001 | Maize | mitochondrion | 20.0 | 8.0 |
| Os01t0706400-01 | Rice | plasma membrane | 88.0 | 7.99 |
| EES03498 | Sorghum | nucleus, plastid | 97.0 | 7.84 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 86.0 | 7.7 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 85.0 | 7.65 |
| TraesCS3B01G288900.2 | Wheat | plastid | 85.0 | 7.38 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 86.0 | 7.27 |
| Zm00001d033714_P001 | Maize | mitochondrion | 25.0 | 7.12 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 77.0 | 6.89 |
| CDY35879 | Canola | mitochondrion | 59.0 | 6.43 |
| Bra039012.1-P | Field mustard | mitochondrion | 59.0 | 6.43 |
| CDX82713 | Canola | mitochondrion | 59.0 | 6.42 |
| Zm00001d052541_P001 | Maize | extracellular | 9.0 | 6.25 |
| Bra011109.1-P | Field mustard | mitochondrion | 56.0 | 6.09 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 57.0 | 6.08 |
| CDY43502 | Canola | mitochondrion | 56.0 | 5.99 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 62.0 | 5.71 |
| KRH49036 | Soybean | mitochondrion | 60.0 | 5.7 |
| Solyc07g032230.2.1 | Tomato | nucleus | 61.0 | 5.68 |
| KRH74171 | Soybean | mitochondrion | 60.0 | 5.64 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 63.0 | 5.34 |
| AT4G29440.1 | Thale cress | mitochondrion | 54.0 | 4.95 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 61.0 | 4.9 |
| Zm00001d053852_P001 | Maize | nucleus | 31.0 | 4.53 |
| Zm00001d028456_P001 | Maize | mitochondrion | 24.0 | 4.52 |
| Zm00001d014521_P001 | Maize | mitochondrion | 23.0 | 2.98 |
| KRH41442 | Soybean | cytosol | 13.0 | 2.91 |
| Zm00001d036913_P001 | Maize | cytosol | 6.0 | 0.98 |
| Zm00001d047884_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d051744_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d048482_P001 | EnsemblPlants:Zm00001d048482_T001 | EnsemblPlantsGene:Zm00001d048482 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 |
| ProteinID:AQL09901.1 | UniParc:UPI000842FF26 | UniProt:A0A1D6PKY6 | MapMan:35.2 | : | : |
Description
Regulator of Vps4 activity in the MVB pathway protein
Coordinates
chr9:+:157059358..157060857
Molecular Weight (calculated)
11754.6 Da
IEP (calculated)
10.751
GRAVY (calculated)
-0.514
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MHKSKGKFSG VLHKGFKPDK CKTSPRMAVG RIKLLRNRKE VQVRQMRREV AQLLEANQDM TARIRVEHVI REEKFMQAYD LIEVYCELIV ARLSIIDSQK
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.