Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047885_P001 | Maize | mitochondrion | 95.8 | 54.8 |
| Zm00001d047886_P001 | Maize | mitochondrion | 95.8 | 54.8 |
| Zm00001d047887_P001 | Maize | mitochondrion | 93.01 | 53.41 |
| Zm00001d028457_P001 | Maize | mitochondrion | 51.05 | 36.5 |
| TraesCS4B01G219400.1 | Wheat | mitochondrion | 54.55 | 29.55 |
| Zm00001d034058_P004 | Maize | mitochondrion | 39.16 | 29.47 |
| TraesCS4D01G219800.1 | Wheat | mitochondrion | 55.94 | 28.47 |
| TraesCS4A01G084800.1 | Wheat | mitochondrion | 55.94 | 28.37 |
| HORVU4Hr1G062260.2 | Barley | plastid | 53.85 | 27.02 |
| Os03t0257500-01 | Rice | mitochondrion | 36.36 | 26.94 |
| TraesCS4A01G084900.2 | Wheat | mitochondrion | 33.57 | 26.52 |
| Zm00001d034057_P001 | Maize | mitochondrion | 41.96 | 26.2 |
| TraesCS4D01G219500.2 | Wheat | mitochondrion | 32.17 | 25.0 |
| HORVU4Hr1G062250.1 | Barley | mitochondrion | 32.17 | 25.0 |
| TraesCS4B01G219300.1 | Wheat | mitochondrion | 31.47 | 24.46 |
| Zm00001d052541_P001 | Maize | extracellular | 20.28 | 20.14 |
| Zm00001d028456_P001 | Maize | mitochondrion | 44.76 | 12.05 |
| VIT_14s0006g03050.t01 | Wine grape | mitochondrion | 11.89 | 10.9 |
| Zm00001d033714_P001 | Maize | mitochondrion | 25.87 | 10.54 |
| PGSC0003DMT400032944 | Potato | mitochondrion | 14.69 | 10.1 |
| KRH45249 | Soybean | mitochondrion | 27.27 | 9.85 |
| KRH75395 | Soybean | mitochondrion | 27.27 | 9.68 |
| Solyc02g085830.2.1 | Tomato | mitochondrion | 13.99 | 9.62 |
| CDY19375 | Canola | mitochondrion | 27.27 | 9.56 |
| AT1G13340.1 | Thale cress | mitochondrion | 27.27 | 9.54 |
| CDY50176 | Canola | mitochondrion | 25.17 | 9.14 |
| CDY21093 | Canola | mitochondrion | 25.17 | 9.11 |
| Zm00001d043813_P001 | Maize | mitochondrion | 20.28 | 9.03 |
| Solyc05g009550.2.1 | Tomato | mitochondrion | 25.87 | 8.67 |
| PGSC0003DMT400033769 | Potato | mitochondrion | 25.87 | 8.67 |
| GSMUA_Achr6P07700_001 | Banana | cytosol, mitochondrion, nucleus | 25.17 | 8.45 |
| Bra019826.1-P | Field mustard | mitochondrion | 27.97 | 8.1 |
| KRH01764 | Soybean | mitochondrion | 24.48 | 7.92 |
| GSMUA_Achr6P24100_001 | Banana | mitochondrion | 26.57 | 7.77 |
| KRH46919 | Soybean | mitochondrion | 21.68 | 7.56 |
| VIT_01s0011g03330.t01 | Wine grape | mitochondrion | 23.08 | 7.05 |
| GSMUA_Achr10P... | Banana | mitochondrion | 22.38 | 6.61 |
| Zm00001d021453_P002 | Maize | plastid | 20.98 | 5.74 |
| Zm00001d049479_P003 | Maize | cytosol, mitochondrion, plastid | 19.58 | 5.13 |
| Bra016733.1-P | Field mustard | mitochondrion | 25.17 | 4.82 |
| Zm00001d024425_P003 | Maize | cytosol | 18.88 | 4.76 |
| Zm00001d053852_P001 | Maize | nucleus | 20.28 | 4.23 |
| Zm00001d014521_P001 | Maize | mitochondrion | 18.18 | 3.37 |
| Zm00001d036913_P001 | Maize | cytosol | 9.79 | 2.29 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 18.88 | 2.23 |
| Zm00001d051744_P001 | Maize | nucleus | 2.8 | 0.8 |
| Zm00001d028142_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d047884_P001 | EnsemblPlants:Zm00001d047884_T001 | EnsemblPlantsGene:Zm00001d047884 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF26 | PFAM:PF03398 | ProteinID:AQL07914.1 |
| SEG:seg | UniParc:UPI000842482F | UniProt:A0A1D6PED7 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr9:+:144197906..144199573
Molecular Weight (calculated)
15667.2 Da
IEP (calculated)
5.550
GRAVY (calculated)
-0.768
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAARRCGDL PELTFARTIL TTKFGGEFAE MAKEGAGVVD PMLVWKLTGN KGDMELKKKV VKEVAAENNV LVDFSELQEV EHGGSGNVPH HHKVSHEGIY
101: QTDMDGSSEP SHDEDPCDTS NSDGASNGHP KQENTRTSVR TRR
101: QTDMDGSSEP SHDEDPCDTS NSDGASNGHP KQENTRTSVR TRR
001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.