Factsheet for Bra019826.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19375	Canola	mitochondrion	80.57	97.55
AT1G13340.1	Thale cress	mitochondrion	63.97	77.26
KRH45249	Soybean	mitochondrion	37.45	46.72
KRH75395	Soybean	mitochondrion	37.85	46.4
Bra016733.1-P	Field mustard	mitochondrion	65.79	43.51
PGSC0003DMT400033769	Potato	mitochondrion	37.25	43.09
Solyc05g009550.2.1	Tomato	mitochondrion	36.44	42.15
TraesCS4B01G219300.1	Wheat	mitochondrion	15.38	41.3
VIT_01s0011g03330.t01	Wine grape	mitochondrion	39.07	41.24
TraesCS4D01G219500.2	Wheat	mitochondrion	14.57	39.13
HORVU4Hr1G062250.1	Barley	mitochondrion	13.97	37.5
TraesCS4A01G084900.2	Wheat	mitochondrion	13.56	37.02
EER92528	Sorghum	mitochondrion	13.56	36.02
EER93588	Sorghum	mitochondrion	24.9	35.96
Os03t0710000-01	Rice	plasma membrane	25.3	35.21
TraesCS4B01G044800.1	Wheat	mitochondrion	23.89	35.12
Zm00001d033714_P001	Maize	mitochondrion	24.9	35.04
Zm00001d034058_P004	Maize	mitochondrion	13.16	34.21
Os03t0257500-01	Rice	mitochondrion	13.36	34.2
TraesCS4D01G044800.1	Wheat	mitochondrion	23.89	34.1
TraesCS4A01G269300.1	Wheat	mitochondrion	24.29	33.9
TraesCS4D01G044400.1	Wheat	mitochondrion	23.89	33.52
TraesCS4B01G045100.1	Wheat	mitochondrion	23.89	33.43
Zm00001d028457_P001	Maize	mitochondrion	13.16	32.5
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	27.94	32.39
GSMUA_Achr6P24100_001	Banana	mitochondrion	29.76	30.06
Zm00001d047887_P001	Maize	mitochondrion	14.98	29.72
Zm00001d047885_P001	Maize	mitochondrion	14.98	29.6
Zm00001d047886_P001	Maize	mitochondrion	14.98	29.6
TraesCS4B01G219400.1	Wheat	mitochondrion	15.59	29.17
Zm00001d034057_P001	Maize	mitochondrion	13.36	28.82
TraesCS4D01G219800.1	Wheat	mitochondrion	16.19	28.47
OQU90964	Sorghum	mitochondrion	9.51	28.14
Zm00001d047884_P001	Maize	cytosol	8.1	27.97
TraesCS4A01G084800.1	Wheat	mitochondrion	15.79	27.66
HORVU4Hr1G062260.2	Barley	plastid	15.38	26.67
Bra012478.1-P	Field mustard	mitochondrion	17.41	26.63
GSMUA_Achr10P...	Banana	mitochondrion	25.91	26.45
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	8.1	23.12
Bra011633.1-P	Field mustard	mitochondrion, plastid	20.24	22.99
Zm00001d028456_P001	Maize	mitochondrion	22.87	21.28
Os03t0257600-01	Rice	mitochondrion	23.08	21.11
EER92527	Sorghum	mitochondrion, plastid	22.87	21.08
Bra010522.1-P	Field mustard	plastid	17.81	20.9
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	22.27	20.3
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	21.86	20.19
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	22.06	20.19
Bra021112.1-P	Field mustard	nucleus	9.72	20.08
HORVU4Hr1G062110.1	Barley	mitochondrion	22.27	20.07
Bra027239.1-P	Field mustard	plastid	9.92	19.37
Bra006177.1-P	Field mustard	mitochondrion	13.36	18.75
Bra018962.1-P	Field mustard	extracellular, vacuole	12.55	17.42
Bra013184.1-P	Field mustard	mitochondrion	8.5	17.36
Bra008502.1-P	Field mustard	nucleus	13.16	17.15
Bra036745.1-P	Field mustard	nucleus	18.83	16.43
Bra039012.1-P	Field mustard	mitochondrion	20.65	11.12
Bra030391.1-P	Field mustard	nucleus	10.93	10.8
Bra011109.1-P	Field mustard	mitochondrion	19.23	10.33
Bra011340.1-P	Field mustard	nucleus	1.01	5.32

Protein Annotations

EnsemblPlants:Bra019826.1	EnsemblPlants:Bra019826.1-P	EnsemblPlantsGene:Bra019826	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg
UniParc:UPI000253EBEA	UniProt:M4DTI3	MapMan:35.2	:	:	:

Description

AT1G13340 (E=1e-136) | unknown protein

Coordinates

chrA06:+:4153052..4154715

Molecular Weight (calculated)

54639.7 Da

IEP (calculated)

4.674

GRAVY (calculated)

-0.646

Length

494 amino acids

Sequence
(BLAST)

001: MGKKLDALLG RTFKTKKFKA LLNLALTRLS ILKNQRQVRC SQATSDVTEL LKLGQHENAY HRVDQVIKDQ NTLDVLFFIH GYFTLLLDRV HLFEHNRDCP
101: DELLEAVSSL LFAASRIGEF PELQEIRNVL VSRFGKDIAA RSIELRSNCG VNPKIIQKLS TRHPPREVRM KVLKEIAAEN NIVLKLEEAS STSTEGQGQG
201: QSDVSKAKLT SEVGEDEIGE GYGLSDLVKR GKQKYKDVAD AAQAAFESAA HAAVAARAAV ELCQFSPCGP DNTGNNGGGS SSSGSGNNKT EQEANDDGDL
301: SKGEVDVRSE SKKFISDPED TIEDVMSLRE DPVKLLEKDD VLYDSEEETK QIAKTNTTTE VKDEESLKDC SDRADEGHVE DVDLSEGEVD VRSESKKSIS
401: DTDDNIEDVM SFREDPVKLL EKAFVVYDSE EETKHNAKTN TTTEVKDEES LMDGSDRADT GHVDSMAHSV EEPIIRKAIL KGPISVRTRQ VRGY

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.