Factsheet for Bra013184.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93076	Canola	mitochondrion	99.17	99.17
CDY15051	Canola	cytosol	52.89	72.32
Bra021112.1-P	Field mustard	nucleus	48.76	49.37
Bra027239.1-P	Field mustard	plastid	50.0	47.83
AT3G15490.1	Thale cress	mitochondrion, nucleus	37.6	43.13
KRH26063	Soybean	cytosol	22.31	25.84
KRH55350	Soybean	extracellular	19.42	23.04
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	14.46	20.23
Bra008502.1-P	Field mustard	nucleus	22.31	14.25
Bra006177.1-P	Field mustard	mitochondrion	20.66	14.2
Bra012478.1-P	Field mustard	mitochondrion	17.77	13.31
Bra018962.1-P	Field mustard	extracellular, vacuole	16.12	10.96
Bra011633.1-P	Field mustard	mitochondrion, plastid	18.59	10.34
Bra010522.1-P	Field mustard	plastid	17.36	9.98
Bra019826.1-P	Field mustard	mitochondrion	17.36	8.5
Bra030391.1-P	Field mustard	nucleus	16.94	8.2
Bra036745.1-P	Field mustard	nucleus	19.01	8.13
Bra016733.1-P	Field mustard	mitochondrion	17.36	5.62
Bra039012.1-P	Field mustard	mitochondrion	19.01	5.02
Bra011109.1-P	Field mustard	mitochondrion	18.18	4.78
Bra011340.1-P	Field mustard	nucleus	1.24	3.19

Protein Annotations

EnsemblPlants:Bra013184.1	EnsemblPlants:Bra013184.1-P	EnsemblPlantsGene:Bra013184	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF20	PFAM:PF03398	UniParc:UPI0002540917
UniProt:M4D9M4	MapMan:35.2	:	:	:	:

Description

AT3G15490 (E=2e-040) | unknown protein

Coordinates

chrA03:+:19999832..20000841

Molecular Weight (calculated)

28079.0 Da

IEP (calculated)

8.749

GRAVY (calculated)

-0.338

Length

242 amino acids

Sequence
(BLAST)

001: MICSSRWRKA SKCKLLIQTL LCSIDAHQRR KECMVRHAQS DINQLLLSNR VQETISKRKH ICEDKTRLAA YAQVQYFCSF ILQNFSDLKH QSDVHLLPEE
101: SKEAIAGLLF AASRIRELRE LKFIRSLFLE RFGLQFDRDS VNLRPGNLVS SEMIKIFVKK MPQDAMSPET IVETNIAAYV ESVTEDSVST DNLGFRDSDA
201: VKIRDIQNMD WEKEYEGEFK VSVCKSCRVS RKRSIIVHEI RV

Best Arabidopsis Sequence Match ( AT3G15490.1 )
(BLAST)

001: MVRQSRSDIA QLLSYGRYSE ALPKAKQFYE DERRLSAYDQ VELFCTTILQ NISSLKYENN VDLLPEETKK AMAGIIFAAS RIGELEDLQH IRSFFVQRFG
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q4PSP2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.