Factsheet for Bra006177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78503	Canola	mitochondrion	98.01	98.01
AT2G14830.1	Thale cress	mitochondrion	70.45	64.58
VIT_12s0059g01700.t01	Wine grape	golgi	30.11	45.49
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	13.92	28.32
Solyc12g010700.1.1	Tomato	cytosol	34.94	27.15
KRH70127	Soybean	mitochondrion, nucleus	26.42	24.47
Bra027239.1-P	Field mustard	plastid	17.33	24.11
Bra021112.1-P	Field mustard	nucleus	15.91	23.43
PGSC0003DMT400020212	Potato	cytosol	25.85	23.04
Bra008502.1-P	Field mustard	nucleus	23.86	22.16
KRH26928	Soybean	nucleus	39.49	20.97
Bra013184.1-P	Field mustard	mitochondrion	14.2	20.66
KRH22410	Soybean	mitochondrion, nucleus	38.64	20.42
Bra018962.1-P	Field mustard	extracellular, vacuole	19.89	19.66
Bra012478.1-P	Field mustard	mitochondrion	17.61	19.2
Bra010522.1-P	Field mustard	plastid	22.44	18.76
Bra011633.1-P	Field mustard	mitochondrion, plastid	22.44	18.16
PGSC0003DMT400047266	Potato	nucleus	27.56	17.83
Bra011340.1-P	Field mustard	nucleus	4.55	17.02
Bra019826.1-P	Field mustard	mitochondrion	18.75	13.36
Bra036745.1-P	Field mustard	nucleus	19.89	12.37
Bra030391.1-P	Field mustard	nucleus	16.76	11.8
Solyc07g054230.2.1	Tomato	nucleus	13.92	10.91
Bra016733.1-P	Field mustard	mitochondrion	19.03	8.97
Bra011109.1-P	Field mustard	mitochondrion	21.02	8.04
Bra039012.1-P	Field mustard	mitochondrion	20.17	7.74

Protein Annotations

EnsemblPlants:Bra006177.1	EnsemblPlants:Bra006177.1-P	EnsemblPlantsGene:Bra006177	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF18	PFAM:PF03398
SEG:seg	UniParc:UPI000253FA46	UniProt:M4CPN8	MapMan:35.2	:	:

Description

AT2G14830 (E=2e-101) | unknown protein

Coordinates

chrA03:+:2365169..2366407

Molecular Weight (calculated)

40909.2 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.595

Length

352 amino acids

Sequence
(BLAST)

001: MFGFLFGWRK ASKCKRALKQ LQRRLNLLKN KKHVISSHLR HDIVQLLRIG ERDRALRRAH DLFLDESLLS LYHLLLQFSD VILLNLSYIR RHREVSDGVS
101: EAVSTLIFAS ARCGDLPELR TLRALLGERY GKLFVSTALY LLPGNRVNSQ IIEKLSRISV SDDAKSKLLS EIAAEFSLQV LALEYTTESH KEAESEAEVC
201: KFTLTDADLE VKQEESLSKP SREQIKVCDD EDCIEEQVVG KDQRIFRFIE SKEETRARKR SRRRSARSSP MPKDVECWRY YNMGNRRRQK KESGQCFHIV
301: YNVFTMRPDQ KVKGEGERGL KEAKHVHPKL PDYDQLAAHF TALRNQHQQQ VP

Best Arabidopsis Sequence Match ( AT2G14830.1 )
(BLAST)

001: MFCFLFGWRR TSKCKSVVKQ LQCRLNLLKN KKYAISSHLR NDIAQLLRIG ERDRALHRAQ QLFLDENLMS LYHLLLHFSD IILLNLSYIR RRRDLPDGIN
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:TAIR;Acc:AT2G14830]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.