CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006177.1-P	Field mustard	mitochondrion	98.01	98.01
CDX70491	Canola	mitochondrion	92.61	86.02
AT2G14830.1	Thale cress	mitochondrion	71.02	65.1
VIT_12s0059g01700.t01	Wine grape	golgi	30.97	46.78
CDY22873	Canola	mitochondrion	45.45	44.69
CDY33850	Canola	mitochondrion	45.17	43.8
CDX87282	Canola	cytosol	18.18	31.68
CDY04642	Canola	cytosol	13.07	30.67
Solyc12g010700.1.1	Tomato	cytosol	35.8	27.81
KRH70127	Soybean	mitochondrion, nucleus	26.7	24.74
CDX98558	Canola	plastid	17.61	24.03
CDX97673	Canola	plastid	17.61	24.03
CDX87899	Canola	nucleus	18.75	23.91
PGSC0003DMT400020212	Potato	cytosol	26.7	23.8
CDY52976	Canola	mitochondrion	20.74	23.62
CDY20110	Canola	nucleus	15.91	23.43
CDY49897	Canola	nucleus	17.61	23.13
CDY21843	Canola	nucleus	15.91	22.86
CDY49898	Canola	mitochondrion	17.61	22.63
CDY41108	Canola	nucleus	24.15	22.49
CDY37561	Canola	nucleus	23.86	22.28
KRH26928	Soybean	nucleus	40.06	21.27
CDX87900	Canola	mitochondrion	17.05	20.83
KRH22410	Soybean	mitochondrion, nucleus	39.2	20.72
CDX93076	Canola	mitochondrion	14.2	20.66
CDY53122	Canola	mitochondrion	17.9	19.5
CDY58595	Canola	mitochondrion	17.9	19.5
CDY41639	Canola	plastid	23.3	19.07
CDY69937	Canola	plastid	22.44	19.04
CDY15051	Canola	cytosol	9.38	18.64
CDX75521	Canola	plastid	22.44	18.24
PGSC0003DMT400047266	Potato	nucleus	27.84	18.01
CDX69159	Canola	plastid	22.44	17.95
CDY21093	Canola	mitochondrion	18.75	16.71
CDY50176	Canola	mitochondrion	18.47	16.5
CDY19375	Canola	mitochondrion	18.75	16.18
CDY48635	Canola	cytosol	13.07	13.73
CDX75238	Canola	nucleus	23.3	13.0
CDX68838	Canola	nucleus	22.73	12.7
CDY46461	Canola	cytosol, mitochondrion, nucleus	20.17	12.54
CDX91784	Canola	nucleus	20.17	12.24
Solyc07g054230.2.1	Tomato	nucleus	13.92	10.91
CDY43502	Canola	mitochondrion	22.44	8.45
CDY35879	Canola	mitochondrion	20.17	7.74
CDX82713	Canola	mitochondrion	19.89	7.62

Protein Annotations

EnsemblPlants:CDX78503	EnsemblPlantsGene:GSBRNA2T00129903001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF18	PFAM:PF03398	ProteinID:CDX78503
ProteinID:CDX78503.1	SEG:seg	UniParc:UPI0004EE63ED	MapMan:35.2	:	:

Description

BnaA03g04150D

Coordinates

chrLK031815:+:1039691..1040927

Molecular Weight (calculated)

40974.3 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.604

Length

352 amino acids

Sequence
(BLAST)

001: MFGFLFGWRK ASKCKRTLKQ LQRRLNLLKN KKHVISSHLR HDIVQLLRIG ERDRALRRAH DLFLDESLLS LYHLLLQFSD VILLNLSYIR RHREVSNGVN
101: EAVSTLIFAS ARCGDLPELR TLRALFGERY GKLFVSTALY LLPGNHVNPQ IIEKLSRISV SDDAKSKLLA EIAAEFSLQV LALEYTTESH KEAESEAEVC
201: KFTLTDADLE VKQEESLSKP SREQIKVCDD EDCIEEQVVG KDQRIFRFIE SKEETRARKR SRRRSARSSP MPKDVECWRY YNMGNRRRQK KESGQCFHIV
301: YNVFTMRPDQ KVKGEGERGL KEAKHVHPKL PDYDQLAAHF TALRNQHQQQ VP

Best Arabidopsis Sequence Match ( AT2G14830.1 )
(BLAST)

001: MFCFLFGWRR TSKCKSVVKQ LQCRLNLLKN KKYAISSHLR NDIAQLLRIG ERDRALHRAQ QLFLDENLMS LYHLLLHFSD IILLNLSYIR RRRDLPDGIN
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:TAIR;Acc:AT2G14830]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.