CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87900	Canola	mitochondrion	96.35	91.67
CDY52976	Canola	mitochondrion	74.09	65.7
AT1G52315.1	Thale cress	mitochondrion	75.55	59.65
Bra030391.1-P	Field mustard	nucleus	97.08	53.2
CDY49897	Canola	nucleus	46.35	47.39
CDX87899	Canola	nucleus	46.72	46.38
GSMUA_Achr5P23530_001	Banana	nucleus	27.74	42.46
CDX87282	Canola	cytosol	28.83	39.11
CDY37561	Canola	nucleus	34.67	25.2
CDY41108	Canola	nucleus	34.67	25.13
CDY04642	Canola	cytosol	12.77	23.33
CDY53122	Canola	mitochondrion	22.99	19.5
CDY58595	Canola	mitochondrion	22.99	19.5
CDY20110	Canola	nucleus	16.79	19.25
CDY21843	Canola	nucleus	16.42	18.37
CDX98558	Canola	plastid	16.79	17.83
CDX78503	Canola	mitochondrion	22.63	17.61
CDX97673	Canola	plastid	16.42	17.44
CDX93076	Canola	mitochondrion	15.33	17.36
GSMUA_Achr6P29590_001	Banana	cytosol	27.37	16.38
CDY69937	Canola	plastid	24.45	16.14
CDX70491	Canola	mitochondrion	22.26	16.09
CDY41639	Canola	plastid	24.82	15.81
CDY22873	Canola	mitochondrion	20.07	15.36
CDX75521	Canola	plastid	23.72	15.01
CDY33850	Canola	mitochondrion	19.71	14.88
CDX69159	Canola	plastid	23.72	14.77
CDY50176	Canola	mitochondrion	20.44	14.21
CDY21093	Canola	mitochondrion	20.07	13.92
CDY19375	Canola	mitochondrion	20.44	13.73
CDX68838	Canola	nucleus	31.39	13.65
CDY15051	Canola	cytosol	8.76	13.56
CDX75238	Canola	nucleus	31.02	13.47
Os02t0159200-01	Rice	nucleus	31.39	12.74
Zm00001d053852_P001	Maize	nucleus	31.39	12.55
HORVU6Hr1G025460.3	Barley	nucleus	33.58	12.5
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	32.48	12.45
EES04550	Sorghum	nucleus	31.02	12.45
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	32.12	12.34
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	32.12	12.31
GSMUA_Achr8P15690_001	Banana	mitochondrion	29.56	12.09
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	31.02	11.99
CDY46461	Canola	cytosol, mitochondrion, nucleus	24.45	11.84
Os06t0687000-00	Rice	mitochondrion	31.39	11.8
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	31.02	11.71
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	30.66	11.55
CDX91784	Canola	nucleus	24.45	11.55
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	29.93	11.29
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	27.37	11.14
KXG20673	Sorghum	cytosol, nucleus, plastid	31.39	10.96
Zm00001d014521_P001	Maize	mitochondrion	28.83	10.25
CDY48635	Canola	cytosol	11.68	9.55
CDY35879	Canola	mitochondrion	19.71	5.89
CDX82713	Canola	mitochondrion	19.34	5.77
Zm00001d036913_P001	Maize	cytosol	12.41	5.56
CDY43502	Canola	mitochondrion	18.61	5.45
Zm00001d051744_P001	Maize	nucleus	5.84	3.19

Protein Annotations

EnsemblPlants:CDY49898	EnsemblPlantsGene:GSBRNA2T00094052001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF14	PFAM:PF03398	ProteinID:CDY49898	ProteinID:CDY49898.1
SEG:seg	UniParc:UPI0004EE8666	UniProt:A0A078ILF8	MapMan:35.2	:	:

Description

BnaA05g14950DBnaA05g14950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILF8]

Coordinates

chrLK032867:+:8096..9448

Molecular Weight (calculated)

31377.6 Da

IEP (calculated)

9.137

GRAVY (calculated)

-0.522

Length

274 amino acids

Sequence
(BLAST)

001: MNIFLRCFKP KFYKKSKSTT SYMKIRLDIV RKKRIAMVNF LKMDIVDFLK NGLEYNAYTR AEMLLEELRI ISCYDIIERF CDSISENLSL MLKKRECPEE
101: CKEAVSSLIH AAAWVPDVPE LKDLRAVFTK RFGSFIHSSV NHELVEKTEL RSRPSRELKI QTVKDIAKEF SIDWDPTALN LFLLGQTSSS QIDDKVETGT
201: DDSKIREEKS IVNDQSENES VLSESWTRDS LSKGSLSSSS SSSLSSPRRD SEKKKILPYG LISPPRTKPG GRNN

Best Arabidopsis Sequence Match ( AT1G52315.1 )
(BLAST)

001: MFLRCFKPKF YKKSKSTTSY MKIRIDIVRR KRIAMVRNYK TDIVNFLKNG QDSEAYRRAE LLLEELRIIS CYDLIERFCD CISENLSLML KKRECPEECR
101: EAVSSLIYAT AWVPDVPELK DLRAVFTKRF GNFIASSVNH ELVEKTELLR PPSRELKIQT VKDVANEFSI NWDPTPLKLM LLRETSALQI KDKVETRADY
201: LNKDTEKSFM DEHSDDESVL SESWRIDSLS KGSLSSSSSS SSSSLRRVSV RKKKGKKILP YGIISSPDTK LGAGNDEKAQ EEKEEKRKIA DQENSRLLGI
301: QGSRSLTSTS NNEVSTIREN ERMSSFQRPN LLDYDDVVAR LAALRRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ICV8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.