Factsheet for Bra030391.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49898	Canola	mitochondrion	53.2	97.08
Bra018962.1-P	Field mustard	extracellular, vacuole	42.8	60.11
AT1G52315.1	Thale cress	mitochondrion	40.4	58.21
GSMUA_Achr5P23530_001	Banana	nucleus	15.0	41.9
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	11.4	32.95
Bra008502.1-P	Field mustard	nucleus	18.4	24.27
Bra021112.1-P	Field mustard	nucleus	9.0	18.83
Bra012478.1-P	Field mustard	mitochondrion	12.0	18.58
Bra027239.1-P	Field mustard	plastid	8.6	17.0
Bra013184.1-P	Field mustard	mitochondrion	8.2	16.94
Bra006177.1-P	Field mustard	mitochondrion	11.8	16.76
GSMUA_Achr6P29590_001	Banana	cytosol	14.6	15.94
Bra010522.1-P	Field mustard	plastid	13.0	15.44
Bra011633.1-P	Field mustard	mitochondrion, plastid	12.6	14.48
Os02t0159200-01	Rice	nucleus	16.6	12.3
HORVU6Hr1G025460.3	Barley	nucleus	18.0	12.23
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	17.4	12.17
Zm00001d053852_P001	Maize	nucleus	16.6	12.12
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	17.2	12.06
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	17.2	12.03
EES04550	Sorghum	nucleus	16.4	12.01
GSMUA_Achr8P15690_001	Banana	mitochondrion	15.8	11.79
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	16.6	11.71
Bra036745.1-P	Field mustard	nucleus	13.2	11.66
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	16.6	11.43
Os06t0687000-00	Rice	mitochondrion	16.6	11.39
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	16.4	11.28
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	16.0	11.02
Bra019826.1-P	Field mustard	mitochondrion	10.8	10.93
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	14.6	10.85
KXG20673	Sorghum	cytosol, nucleus, plastid	16.6	10.57
Zm00001d014521_P001	Maize	mitochondrion	15.6	10.12
Bra016733.1-P	Field mustard	mitochondrion	10.6	7.1
Bra039012.1-P	Field mustard	mitochondrion	10.6	5.78
Zm00001d036913_P001	Maize	cytosol	6.8	5.56
Bra011109.1-P	Field mustard	mitochondrion	9.8	5.33
Zm00001d051744_P001	Maize	nucleus	3.2	3.19
Bra011340.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Bra030391.1	EnsemblPlants:Bra030391.1-P	EnsemblPlantsGene:Bra030391	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF14	PFAM:PF03398	SEG:seg
UniParc:UPI00025478F9	UniProt:M4ENM1	MapMan:35.2	:	:	:

Description

AT1G52315 (E=8e-093) | unknown protein

Coordinates

chrA05:-:10815289..10818783

Molecular Weight (calculated)

57802.3 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.641

Length

500 amino acids

Sequence
(BLAST)

001: MICGYFKPKF YKKCKHLIKF IKIRLNIQRK KKNAMVSFLK TDIVEILKTG QEDDERAYIK VEELLEYRQM IASYDLIERC CDCISSNLPL MLNQRECPEE
101: CREAVYSLIY AAAWVRKVPE LKDLRALFTR RYGDSIDAYI NQELVEKLVW RKPSREFKVQ TLQEIAQEAK ISWDSLSKGS LSSSSSLSSK RRESVKKIFP
201: YKKQGAQNDE QGHDEKKDES TVQEKSRLRG PPRQCESHKH KHKSTTSYMK IRLDIVRKKR IAMVNFLEMD IVDFLKNGLE YNAYTRAEML LEELRIISCY
301: DIIERFCDSI SENLSLMLKK RECPEECKEA VSSLIHAAAW VPDVPELKDL RAVFTKRFGS FIHSSVNHEL VEKTELRSRP SRELKIQTVK DIAKEFSIDW
401: DPTALNLFLL GQTSSSQIDD KVETGTDDSK IREEKSIVND QSENESVLSE SWTRDSLSKG SLSSSSSSSL SSPRRDSEKK KILPYGLISP PRTKPGGRNN

Best Arabidopsis Sequence Match ( AT1G52315.1 )
(BLAST)

001: MFLRCFKPKF YKKSKSTTSY MKIRIDIVRR KRIAMVRNYK TDIVNFLKNG QDSEAYRRAE LLLEELRIIS CYDLIERFCD CISENLSLML KKRECPEECR
101: EAVSSLIYAT AWVPDVPELK DLRAVFTKRF GNFIASSVNH ELVEKTELLR PPSRELKIQT VKDVANEFSI NWDPTPLKLM LLRETSALQI KDKVETRADY
201: LNKDTEKSFM DEHSDDESVL SESWRIDSLS KGSLSSSSSS SSSSLRRVSV RKKKGKKILP YGIISSPDTK LGAGNDEKAQ EEKEEKRKIA DQENSRLLGI
301: QGSRSLTSTS NNEVSTIREN ERMSSFQRPN LLDYDDVVAR LAALRRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ICV8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.