Factsheet for Os02t0159200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0101400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79910.1	Os07t0101400-01	AT2G39760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04550	Sorghum	nucleus	66.81	66.03
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	69.19	65.31
Zm00001d053852_P001	Maize	nucleus	65.04	64.09
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	67.85	64.06
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	67.41	63.81
HORVU6Hr1G025460.3	Barley	nucleus	66.81	61.28
GSMUA_Achr5P23530_001	Banana	nucleus	14.22	53.63
KRH06586	Soybean	cytosol	4.3	47.54
Os06t0687000-00	Rice	mitochondrion	49.93	46.23
GSMUA_Achr6P29590_001	Banana	cytosol	28.15	41.48
KRG89505	Soybean	mitochondrion	11.41	40.74
CDX87282	Canola	cytosol	11.11	37.13
GSMUA_Achr8P15690_001	Banana	mitochondrion	34.52	34.78
PGSC0003DMT400042551	Potato	nucleus	15.7	34.3
Solyc06g066690.2.1	Tomato	nucleus	15.7	34.3
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.07	34.18
CDX87899	Canola	nucleus	13.93	34.06
CDY52976	Canola	mitochondrion	14.52	31.72
CDY49898	Canola	mitochondrion	12.74	31.39
VIT_09s0002g04580.t01	Wine grape	nucleus	23.26	31.34
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	7.85	30.64
CDY49897	Canola	nucleus	12.15	30.6
KRH23458	Soybean	mitochondrion	18.07	30.58
CDX87900	Canola	mitochondrion	12.89	30.21
AT1G79910.1	Thale cress	nucleus	17.04	30.18
Solyc03g120120.2.1	Tomato	nucleus	21.04	29.83
CDY37561	Canola	nucleus	16.59	29.71
CDY41108	Canola	nucleus	16.59	29.63
Bra008502.1-P	Field mustard	nucleus	16.59	29.55
KRH44367	Soybean	mitochondrion	14.07	29.5
AT1G52315.1	Thale cress	mitochondrion	15.11	29.39
PGSC0003DMT400014529	Potato	nucleus	19.56	29.33
Solyc12g043150.1.1	Tomato	nucleus	21.93	29.02
KRH47048	Soybean	mitochondrion	16.3	28.8
Bra018962.1-P	Field mustard	extracellular, vacuole	14.81	28.09
PGSC0003DMT400092826	Potato	nucleus	16.0	25.41
Os03t0257500-01	Rice	mitochondrion	7.26	25.39
VIT_11s0016g04010.t01	Wine grape	nucleus	25.19	23.42
KRH48400	Soybean	mitochondrion, nucleus	25.33	23.27
KRH39280	Soybean	mitochondrion, nucleus	25.19	23.13
CDX68838	Canola	nucleus	21.48	23.02
CDX75238	Canola	nucleus	21.48	22.98
KRH60286	Soybean	nucleus	23.85	21.02
PGSC0003DMT400022180	Potato	nucleus	16.59	20.29
AT4G32350.1	Thale cress	nucleus	21.63	19.95
KRH41578	Soybean	nucleus	23.56	19.92
Solyc07g022860.2.1	Tomato	nucleus	16.15	19.78
Os01t0687700-01	Rice	mitochondrion, plasma membrane	8.89	18.81
Os09t0547200-01	Rice	mitochondrion	12.15	17.23
Bra030391.1-P	Field mustard	nucleus	12.3	16.6
Os03t0710000-01	Rice	plasma membrane	8.59	16.34
Os08t0175200-01	Rice	nucleus	11.26	13.55
Os03t0257600-01	Rice	mitochondrion	10.67	13.33
Os01t0706400-01	Rice	plasma membrane	14.07	8.63

Protein Annotations

EMBL:AK102507	EnsemblPlants:Os02t0159200-01	EnsemblPlantsGene:Os02g0159200	EntrezGene:4328370	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF14	PFAM:PF03398
ProteinID:BAD28039.1	ProteinID:BAF07875.1	ProteinID:BAS77086.1	RefSeq:XP_015626264.1	SEG:seg	UniParc:UPI00003CE5C6
UniProt:Q6ETI1	MapMan:35.2	:	:	:	:

Description

Protein of unknown function DUF292, eukaryotic domain containing protein. (Os02t0159200-01);Hypothetical conserved gene. (Os02t0159200-02)

Coordinates

chr2:+:3212392..3216605

Molecular Weight (calculated)

76634.1 Da

IEP (calculated)

9.632

GRAVY (calculated)

-1.095

Length

675 amino acids

Sequence
(BLAST)

001: MFDSLLNSKF YNKCKHAIKC TRTRLDLVRR KKQAMVKFMK KDVADLIGNR LESHAFGRME ALIVEMNQAS CYDMIEQYCE YIVKQLNNLQ KQNECPQEAL
101: EAVSTLIFAT ARFPELPELC DLRHMFTERY GSFVEPFVSS EFVQKLQNKS FTNEEKLQVM QSIAEEFSVP FNSKALERKI SGVPQNKHDL QNKSSFKRVE
201: VEASACNELK VDRHAVHERK SKVTPEVHER KQEMPVKPKD IHVIPDAIGK VGEKSRKNRS DIPYDVPPSD LKQINDQELK KDHKKHSHHQ RELRNADKSA
301: PPYAEPKEDV AEKSDGKGYH VHRSRMAGGL DHNWGHADLG LKTLGLEKQG IEPASSLDGK TLNKAPPYSK PYKASDEYGQ SVQDRQKMPE KAVNMRPPYV
401: KPNSTNQAVD DYKHAGTGEI GHQRDGLADD NTLQPVSVRR KSAKPPTHGD RYDDEAKMTS QTPGGRRRHS SRRNGSDDDY DQRVGYMLPP DDDAVNNARH
501: FKRMSERRKH GSRQGGSASG NDYESDEDET NSVIDFGNLL PRAPSSHRKH RSRSAHPRSG GRDDEERVMD KLLMHYSKKG IDREEHKTRT KSRTPRPRAD
601: QPADGVGERS NREVAPQHPP ERTVSLPSDS GNLGVKPKAP ARSISMQPDK SRGIVHPSMP DFDELAARIS ALRKE

Best Arabidopsis Sequence Match ( AT1G79910.1 )
(BLAST)

001: MFDGLFKPKF YTKCKSLVKI TKTRVDTVKR KKNSVCKYLK NDIVDLLKNS LDYNAYGRAE GLIEEKRRLA CYEFLEQFCN CVASNVSLLQ KSIRCPDECR
101: EAISSLVYAA ARVSEVPELR DLRSLFAERY GNTLDQFVNP EFVERFKAEP PSKEMKVELL QEIAREYSIK WDAKSLEQRL YTPPHHHHVH TETEEPKTEK
201: TNSEPEKTME KRSSLSFHGR EDSMDDSNKS IMSTSEEDSM STSGSCMTGP EDDPEMKPFY YRFMTPAPYT KPKIEKQESL PEKMTTSHLM DTESPTGGKP
301: KPRSVRRRFA NPPPEAETEG EALKLKVESK NMMRASESMG KASGEGFRRM SRRTASWQHK PSSCVPDFDE VAARVDALSR Y

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8L402]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.