Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87899 | Canola | nucleus | 82.46 | 80.07 |
| CDY49898 | Canola | mitochondrion | 47.39 | 46.35 |
| CDX87900 | Canola | mitochondrion | 48.13 | 44.79 |
| CDY52976 | Canola | mitochondrion | 48.88 | 42.39 |
| CDX87282 | Canola | cytosol | 27.99 | 37.13 |
| GSMUA_Achr5P23530_001 | Banana | nucleus | 23.51 | 35.2 |
| CDY04642 | Canola | cytosol | 14.55 | 26.0 |
| CDY37561 | Canola | nucleus | 31.72 | 22.55 |
| CDY41108 | Canola | nucleus | 31.72 | 22.49 |
| CDY20110 | Canola | nucleus | 17.54 | 19.67 |
| CDX93076 | Canola | mitochondrion | 17.16 | 19.01 |
| CDX97673 | Canola | plastid | 18.28 | 18.99 |
| CDX98558 | Canola | plastid | 18.28 | 18.99 |
| CDY21843 | Canola | nucleus | 17.16 | 18.78 |
| CDY58595 | Canola | mitochondrion | 21.27 | 17.65 |
| CDY53122 | Canola | mitochondrion | 21.27 | 17.65 |
| CDX78503 | Canola | mitochondrion | 23.13 | 17.61 |
| CDY15051 | Canola | cytosol | 11.57 | 17.51 |
| GSMUA_Achr6P29590_001 | Banana | cytosol | 28.73 | 16.81 |
| CDX70491 | Canola | mitochondrion | 23.51 | 16.62 |
| CDY22873 | Canola | mitochondrion | 21.27 | 15.92 |
| CDY33850 | Canola | mitochondrion | 21.27 | 15.7 |
| CDY69937 | Canola | plastid | 22.39 | 14.46 |
| CDX75521 | Canola | plastid | 23.13 | 14.32 |
| CDX69159 | Canola | plastid | 23.51 | 14.32 |
| CDY41639 | Canola | plastid | 22.76 | 14.19 |
| CDY21093 | Canola | mitochondrion | 20.52 | 13.92 |
| CDY19375 | Canola | mitochondrion | 20.9 | 13.73 |
| CDY50176 | Canola | mitochondrion | 19.78 | 13.45 |
| CDX68838 | Canola | nucleus | 29.1 | 12.38 |
| CDX75238 | Canola | nucleus | 29.1 | 12.36 |
| Os02t0159200-01 | Rice | nucleus | 30.6 | 12.15 |
| Zm00001d053852_P001 | Maize | nucleus | 30.6 | 11.97 |
| TraesCS6D01G122600.1 | Wheat | cytosol, nucleus, plastid | 31.72 | 11.89 |
| TraesCS6B01G161300.1 | Wheat | cytosol, nucleus, plastid | 31.34 | 11.78 |
| TraesCS6A01G133000.1 | Wheat | cytosol, nucleus, plastid | 31.34 | 11.75 |
| EES04550 | Sorghum | nucleus | 29.85 | 11.71 |
| HORVU6Hr1G025460.3 | Barley | nucleus | 31.72 | 11.55 |
| GSMUA_Achr8P15690_001 | Banana | mitochondrion | 28.73 | 11.49 |
| CDY46461 | Canola | cytosol, mitochondrion, nucleus | 24.25 | 11.48 |
| CDX91784 | Canola | nucleus | 24.25 | 11.21 |
| GSMUA_Achr9P11280_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 27.99 | 11.14 |
| TraesCS7A01G445700.1 | Wheat | cytosol, mitochondrion, nucleus | 29.48 | 11.14 |
| CDY48635 | Canola | cytosol | 13.81 | 11.04 |
| Os06t0687000-00 | Rice | mitochondrion | 29.85 | 10.97 |
| HORVU7Hr1G101130.3 | Barley | cytosol, nucleus | 29.48 | 10.88 |
| TraesCS7D01G433700.1 | Wheat | cytosol, mitochondrion, nucleus | 29.48 | 10.88 |
| TraesCS7B01G345200.1 | Wheat | cytosol, nucleus, plastid | 29.48 | 10.87 |
| KXG20673 | Sorghum | cytosol, nucleus, plastid | 29.85 | 10.19 |
| Zm00001d014521_P001 | Maize | mitochondrion | 28.36 | 9.86 |
| CDY35879 | Canola | mitochondrion | 21.64 | 6.32 |
| CDX82713 | Canola | mitochondrion | 21.27 | 6.2 |
| CDY43502 | Canola | mitochondrion | 21.27 | 6.1 |
| Zm00001d036913_P001 | Maize | cytosol | 9.7 | 4.26 |
| Zm00001d051744_P001 | Maize | nucleus | 3.36 | 1.79 |
Protein Annotations
| EnsemblPlants:CDY49897 | EnsemblPlantsGene:GSBRNA2T00094051001 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF14 | PFAM:PF03398 | ProteinID:CDY49897 | ProteinID:CDY49897.1 |
| SEG:seg | UniParc:UPI0004EEBEC7 | UniProt:A0A078IIY8 | MapMan:35.2 | : | : |
Description
BnaA05g14960DBnaA05g14960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIY8]
Coordinates
chrLK032867:+:5960..7969
Molecular Weight (calculated)
31758.5 Da
IEP (calculated)
9.969
GRAVY (calculated)
-0.623
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MICGYFKPKF YKKCKHLIKF IKIRLNIQRK KKNAMVSFLK TDIVEILKTG QEDDERAYIK VEELLEYRQM IASYDLIERC CDCISSNLPL MLNQRECPEE
101: CREAVYSLIY AAAWVRKVPE LKDLRALFTR RYGDSIDAYI NQELVEKLVW RKPSREFKVQ TLQEIAQEAK ISWDSLSKGS LSSSSSLSSK RRESVKKIFP
201: YKKQGAQNDE QGHDEKKDES TVQEKSRLRG PPRQCESHKH KQKVFFWIIH NFFSLSLRRN FMVRFFAS
101: CREAVYSLIY AAAWVRKVPE LKDLRALFTR RYGDSIDAYI NQELVEKLVW RKPSREFKVQ TLQEIAQEAK ISWDSLSKGS LSSSSSLSSK RRESVKKIFP
201: YKKQGAQNDE QGHDEKKDES TVQEKSRLRG PPRQCESHKH KQKVFFWIIH NFFSLSLRRN FMVRFFAS
001: MFLRCFKPKF YKKSKSTTSY MKIRIDIVRR KRIAMVRNYK TDIVNFLKNG QDSEAYRRAE LLLEELRIIS CYDLIERFCD CISENLSLML KKRECPEECR
101: EAVSSLIYAT AWVPDVPELK DLRAVFTKRF GNFIASSVNH ELVEKTELLR PPSRELKIQT VKDVANEFSI NWDPTPLKLM LLRETSALQI KDKVETRADY
201: LNKDTEKSFM DEHSDDESVL SESWRIDSLS KGSLSSSSSS SSSSLRRVSV RKKKGKKILP YGIISSPDTK LGAGNDEKAQ EEKEEKRKIA DQENSRLLGI
301: QGSRSLTSTS NNEVSTIREN ERMSSFQRPN LLDYDDVVAR LAALRRR
101: EAVSSLIYAT AWVPDVPELK DLRAVFTKRF GNFIASSVNH ELVEKTELLR PPSRELKIQT VKDVANEFSI NWDPTPLKLM LLRETSALQI KDKVETRADY
201: LNKDTEKSFM DEHSDDESVL SESWRIDSLS KGSLSSSSSS SSSSLRRVSV RKKKGKKILP YGIISSPDTK LGAGNDEKAQ EEKEEKRKIA DQENSRLLGI
301: QGSRSLTSTS NNEVSTIREN ERMSSFQRPN LLDYDDVVAR LAALRRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ICV8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.