Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013184.1-P | Field mustard | mitochondrion | 72.32 | 52.89 |
| CDX93076 | Canola | mitochondrion | 72.32 | 52.89 |
| AT3G15490.1 | Thale cress | mitochondrion, nucleus | 49.15 | 41.23 |
| CDX98558 | Canola | plastid | 49.72 | 34.11 |
| CDX97673 | Canola | plastid | 49.72 | 34.11 |
| CDY20110 | Canola | nucleus | 38.42 | 28.45 |
| CDY21843 | Canola | nucleus | 37.85 | 27.35 |
| KRH26063 | Soybean | cytosol | 19.77 | 16.75 |
| KRH55350 | Soybean | extracellular | 18.08 | 15.69 |
| CDY04642 | Canola | cytosol | 12.43 | 14.67 |
| CDX87899 | Canola | nucleus | 20.34 | 13.04 |
| CDX87282 | Canola | cytosol | 13.56 | 11.88 |
| CDY49897 | Canola | nucleus | 17.51 | 11.57 |
| CDX78503 | Canola | mitochondrion | 18.64 | 9.38 |
| CDY22873 | Canola | mitochondrion | 18.64 | 9.22 |
| CDY37561 | Canola | nucleus | 19.21 | 9.02 |
| CDY41108 | Canola | nucleus | 19.21 | 8.99 |
| CDY33850 | Canola | mitochondrion | 18.08 | 8.82 |
| CDY49898 | Canola | mitochondrion | 13.56 | 8.76 |
| CDX70491 | Canola | mitochondrion | 18.08 | 8.44 |
| CDX87900 | Canola | mitochondrion | 13.56 | 8.33 |
| CDY52976 | Canola | mitochondrion | 14.12 | 8.09 |
| CDX75521 | Canola | plastid | 19.77 | 8.08 |
| CDY58595 | Canola | mitochondrion | 14.69 | 8.05 |
| CDY53122 | Canola | mitochondrion | 14.69 | 8.05 |
| CDX69159 | Canola | plastid | 19.77 | 7.95 |
| CDY69937 | Canola | plastid | 18.08 | 7.71 |
| CDY41639 | Canola | plastid | 17.51 | 7.21 |
| CDY50176 | Canola | mitochondrion | 14.69 | 6.6 |
| CDY21093 | Canola | mitochondrion | 14.69 | 6.58 |
| CDY19375 | Canola | mitochondrion | 14.12 | 6.13 |
| CDY48635 | Canola | cytosol | 10.73 | 5.67 |
| CDX91784 | Canola | nucleus | 16.38 | 5.0 |
| CDY46461 | Canola | cytosol, mitochondrion, nucleus | 15.25 | 4.77 |
| CDX75238 | Canola | nucleus | 15.82 | 4.44 |
| CDX68838 | Canola | nucleus | 15.25 | 4.29 |
| CDY35879 | Canola | mitochondrion | 18.08 | 3.49 |
| CDX82713 | Canola | mitochondrion | 18.08 | 3.48 |
| CDY43502 | Canola | mitochondrion | 16.95 | 3.21 |
Protein Annotations
| EnsemblPlants:CDY15051 | EnsemblPlantsGene:GSBRNA2T00085158001 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | InterPro:Ist1 |
| PANTHER:PTHR12161 | PANTHER:PTHR12161:SF16 | ProteinID:CDY15051 | ProteinID:CDY15051.1 | SEG:seg | UniParc:UPI0004EF380F |
| UniProt:A0A078FPP7 | MapMan:35.2 | : | : | : | : |
Description
BnaC03g44120DBnaC03g44120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPP7]
Coordinates
chrLK032051:-:61081..61877
Molecular Weight (calculated)
20409.7 Da
IEP (calculated)
10.151
GRAVY (calculated)
-0.451
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRQAQFDIN QLLLSNRVQE TISKRKHICE DKTRLAAYAQ KKVKKQSPDL YLPHQGELNE LKFIRSLFFE RFGLQFDRDS VDLRPGNLVS SEIIKIFVKK
101: MPQGAMSPVE TNIAASVESV TEDSVSTDNL GFRDSDAVKI EIFKTWIGRK NIMKESSKFL HLNLVDSQGR DRSLFMR
101: MPQGAMSPVE TNIAASVESV TEDSVSTDNL GFRDSDAVKI EIFKTWIGRK NIMKESSKFL HLNLVDSQGR DRSLFMR
001: MVRQSRSDIA QLLSYGRYSE ALPKAKQFYE DERRLSAYDQ VELFCTTILQ NISSLKYENN VDLLPEETKK AMAGIIFAAS RIGELEDLQH IRSFFVQRFG
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q4PSP2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.