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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21093 Canola mitochondrion 94.92 94.68
AT1G13340.1 Thale cress mitochondrion 80.2 77.26
CDY19375 Canola mitochondrion 79.95 77.21
KRH45249 Soybean mitochondrion 45.18 44.95
KRH75395 Soybean mitochondrion 45.94 44.91
VIT_01s0011g03330.t01 Wine grape mitochondrion 49.75 41.88
Solyc05g009550.2.1 Tomato mitochondrion 44.67 41.22
TraesCS4B01G219300.1 Wheat mitochondrion 19.04 40.76
PGSC0003DMT400033769 Potato mitochondrion 44.16 40.75
TraesCS4D01G219500.2 Wheat mitochondrion 18.53 39.67
HORVU4Hr1G062250.1 Barley mitochondrion 17.77 38.04
TraesCS4A01G084900.2 Wheat mitochondrion 17.26 37.57
EER92528 Sorghum mitochondrion 17.51 37.1
EER93588 Sorghum mitochondrion 30.96 35.67
Os03t0710000-01 Rice plasma membrane 31.98 35.49
Zm00001d033714_P001 Maize mitochondrion 31.47 35.33
Os03t0257500-01 Rice mitochondrion 17.26 35.23
Zm00001d034058_P004 Maize mitochondrion 16.75 34.74
TraesCS4B01G044800.1 Wheat mitochondrion 29.19 34.23
TraesCS4D01G044800.1 Wheat mitochondrion 29.95 34.1
TraesCS4B01G045100.1 Wheat mitochondrion 29.95 33.43
TraesCS4A01G269300.1 Wheat mitochondrion 29.95 33.33
TraesCS4D01G044400.1 Wheat mitochondrion 29.7 33.24
Zm00001d028457_P001 Maize mitochondrion 16.75 33.0
GSMUA_Achr6P07700_001 Banana cytosol, mitochondrion, nucleus 33.5 30.99
Zm00001d047886_P001 Maize mitochondrion 18.53 29.2
Zm00001d047887_P001 Maize mitochondrion 18.27 28.92
Zm00001d034057_P001 Maize mitochondrion 16.75 28.82
Zm00001d047885_P001 Maize mitochondrion 18.27 28.8
TraesCS4B01G219400.1 Wheat mitochondrion 19.29 28.79
GSMUA_Achr6P24100_001 Banana mitochondrion 35.53 28.63
TraesCS4D01G219800.1 Wheat mitochondrion 19.54 27.4
GSMUA_Achr10P... Banana mitochondrion 33.25 27.07
OQU90964 Sorghum mitochondrion 11.42 26.95
TraesCS4A01G084800.1 Wheat mitochondrion 19.04 26.6
CDY04642 Canola cytosol 9.9 26.0
HORVU4Hr1G062260.2 Barley plastid 18.78 25.96
CDX87282 Canola cytosol 13.2 25.74
CDY58595 Canola mitochondrion 21.07 25.7
CDY53122 Canola mitochondrion 21.07 25.7
Zm00001d047884_P001 Maize cytosol 9.14 25.17
Os03t0257600-01 Rice mitochondrion 28.93 21.11
CDX75521 Canola plastid 23.1 21.02
Zm00001d028456_P001 Maize mitochondrion 27.92 20.72
CDX87899 Canola nucleus 14.47 20.65
EER92527 Sorghum mitochondrion, plastid 27.92 20.52
CDY20110 Canola nucleus 12.44 20.5
CDX69159 Canola plastid 22.84 20.45
CDY49898 Canola mitochondrion 14.21 20.44
CDY21843 Canola nucleus 12.69 20.41
TraesCS4A01G085000.1 Wheat mitochondrion, plastid 27.66 20.37
TraesCS4B01G219200.1 Wheat mitochondrion, plastid 27.66 20.11
HORVU4Hr1G062110.1 Barley mitochondrion 27.92 20.07
CDY52976 Canola mitochondrion 15.74 20.06
TraesCS4D01G219400.3 Wheat mitochondrion, plastid 27.41 20.0
CDX87900 Canola mitochondrion 14.47 19.79
CDY49897 Canola nucleus 13.45 19.78
CDY69937 Canola plastid 20.56 19.52
CDX98558 Canola plastid 12.69 19.38
CDY41639 Canola plastid 20.81 19.07
CDX97673 Canola plastid 12.44 18.99
CDX78503 Canola mitochondrion 16.5 18.47
CDX93076 Canola mitochondrion 10.91 17.77
CDY22873 Canola mitochondrion 15.99 17.6
CDX70491 Canola mitochondrion 16.24 16.89
CDY33850 Canola mitochondrion 15.48 16.8
CDY41108 Canola nucleus 15.74 16.4
CDY37561 Canola nucleus 15.48 16.18
CDY46461 Canola cytosol, mitochondrion, nucleus 22.34 15.55
CDX91784 Canola nucleus 22.59 15.34
CDY48635 Canola cytosol 12.94 15.22
CDY15051 Canola cytosol 6.6 14.69
CDX82713 Canola mitochondrion 25.38 10.88
CDY35879 Canola mitochondrion 25.13 10.8
CDY43502 Canola mitochondrion 23.35 9.84
CDX68838 Canola nucleus 14.21 8.89
CDX75238 Canola nucleus 13.96 8.72
Protein Annotations
EnsemblPlants:CDY50176EnsemblPlantsGene:GSBRNA2T00096097001Gene3D:1.20.1260.60GO:GO:0006810GO:GO:0008150GO:GO:0015031
InterPro:Ist1PANTHER:PTHR12161PANTHER:PTHR12161:SF16PFAM:PF03398ProteinID:CDY50176ProteinID:CDY50176.1
SEG:segUniParc:UPI0004EDD1C7UniProt:A0A078IJK3MapMan:35.2::
Description
BnaC08g15830DBnaC08g15830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJK3]
Coordinates
chrLK032886:+:78908..80278
Molecular Weight (calculated)
44041.1 Da
IEP (calculated)
6.658
GRAVY (calculated)
-0.540
Length
394 amino acids
Sequence
(BLAST)
001: MGKKLDALLG RSFKTNKFKS LLNLAITRLS ILKNQRQVRC SQATSDVTEL LKLGHHENAY HRVDQVIKDQ NTLDVLFFVH GYFTLLIDRV HLFEHNRDCP
101: DEILEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDMAA RSIQLRSNCG VNPTIIQKLS TRHPPREVRM KVLKEIAAEN NIVLKLEEAS STSTEIKSSD
201: VPKAELTSED GEGYELSDSV KRGKKKYKDV ADAAQAAFES AAHAADAARA AVELSQFSPR AGGNSFSGSE NKISEQEGNA DDFRGGEVDL RSESKRSMSD
301: SDEIIEDVPV MSFREDPVKL LEKDVVIYDS EEEIQYTTKP NTTTNVKEKQ HVMDLPNRDT GHVDHTVHSV GDPFMRKVGL KGPVSVRTRQ VRGY
Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)
001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.