CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45249	Soybean	mitochondrion	89.83	91.41
PGSC0003DMT400033769	Potato	mitochondrion	50.62	47.78
Solyc05g009550.2.1	Tomato	mitochondrion	50.37	47.54
VIT_01s0011g03330.t01	Wine grape	mitochondrion	54.84	47.22
CDY50176	Canola	mitochondrion	44.91	45.94
CDY21093	Canola	mitochondrion	44.66	45.57
AT1G13340.1	Thale cress	mitochondrion	44.91	44.25
CDY19375	Canola	mitochondrion	44.66	44.12
TraesCS4D01G219500.2	Wheat	mitochondrion	18.86	41.3
TraesCS4B01G219300.1	Wheat	mitochondrion	18.36	40.22
Zm00001d033714_P001	Maize	mitochondrion	34.74	39.89
EER92528	Sorghum	mitochondrion	18.36	39.78
EER93588	Sorghum	mitochondrion	33.75	39.77
HORVU4Hr1G062250.1	Barley	mitochondrion	18.11	39.67
TraesCS4A01G084900.2	Wheat	mitochondrion	17.62	39.23
Os03t0710000-01	Rice	plasma membrane	34.49	39.15
Bra019826.1-P	Field mustard	mitochondrion	46.4	37.85
Zm00001d034058_P004	Maize	mitochondrion	17.62	37.37
TraesCS4D01G044800.1	Wheat	mitochondrion	31.51	36.71
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	38.71	36.62
Zm00001d028457_P001	Maize	mitochondrion	18.11	36.5
TraesCS4B01G044800.1	Wheat	mitochondrion	30.27	36.31
TraesCS4B01G045100.1	Wheat	mitochondrion	31.76	36.26
TraesCS4A01G269300.1	Wheat	mitochondrion	31.51	35.88
Os03t0257500-01	Rice	mitochondrion	16.87	35.23
GSMUA_Achr6P24100_001	Banana	mitochondrion	42.68	35.17
TraesCS4D01G044400.1	Wheat	mitochondrion	30.27	34.66
KRH46919	Soybean	mitochondrion	33.75	33.17
KRH01764	Soybean	mitochondrion	35.73	32.58
Zm00001d047887_P001	Maize	mitochondrion	20.1	32.53
Zm00001d047885_P001	Maize	mitochondrion	19.85	32.0
Zm00001d047886_P001	Maize	mitochondrion	19.85	32.0
Zm00001d034057_P001	Maize	mitochondrion	18.11	31.88
TraesCS4B01G219400.1	Wheat	mitochondrion	20.35	31.06
OQU90964	Sorghum	mitochondrion	12.66	30.54
GSMUA_Achr10P...	Banana	mitochondrion	36.48	30.37
TraesCS4D01G219800.1	Wheat	mitochondrion	20.35	29.18
HORVU4Hr1G062260.2	Barley	plastid	20.6	29.12
TraesCS4A01G084800.1	Wheat	mitochondrion	20.35	29.08
KRG90825	Soybean	mitochondrion	23.33	29.01
KRH35947	Soybean	mitochondrion	22.83	28.4
KRG89505	Soybean	mitochondrion	13.15	28.04
Zm00001d047884_P001	Maize	cytosol	9.68	27.27
KRH06586	Soybean	cytosol	3.97	26.23
Bra016733.1-P	Field mustard	mitochondrion	44.66	24.1
KRH26063	Soybean	cytosol	11.91	22.97
KRH69704	Soybean	mitochondrion	24.81	22.83
EER92527	Sorghum	mitochondrion, plastid	30.27	22.76
KRH55350	Soybean	extracellular	11.41	22.55
KRH07948	Soybean	mitochondrion	24.57	22.45
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	29.28	21.85
Zm00001d028456_P001	Maize	mitochondrion	28.78	21.85
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	28.78	21.68
Os03t0257600-01	Rice	mitochondrion	28.78	21.48
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	28.29	21.03
HORVU4Hr1G062110.1	Barley	mitochondrion	28.29	20.8
KRH35011	Soybean	mitochondrion	19.85	20.57
KRH08570	Soybean	nucleus	25.56	19.51
KRH70215	Soybean	nucleus	25.56	19.18
KRH44367	Soybean	mitochondrion	15.14	18.94
KRH47048	Soybean	mitochondrion	16.38	17.28
KRH23458	Soybean	mitochondrion	16.63	16.79
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	24.07	16.7
KRH70127	Soybean	mitochondrion, nucleus	15.63	16.58
KRH26928	Soybean	nucleus	19.6	11.92
KRH41442	Soybean	cytosol	13.15	11.88
KRH22410	Soybean	mitochondrion, nucleus	19.6	11.86
KRH49036	Soybean	mitochondrion	28.54	10.92
KRH74171	Soybean	mitochondrion	28.04	10.62
KRH48400	Soybean	mitochondrion, nucleus	18.61	10.2
KRH39280	Soybean	mitochondrion, nucleus	18.36	10.07
KRH60286	Soybean	nucleus	15.88	8.36
KRH41578	Soybean	nucleus	16.13	8.15

Protein Annotations

EMBL:ACUP02000348	EMBL:BT096015	EnsemblPlants:KRH75395	EnsemblPlantsGene:GLYMA_01G083000	EntrezGene:100812818	Gene3D:1.20.1260.60
GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16
PFAM:PF03398	ProteinID:KRH75395	ProteinID:KRH75395.1	SEG:seg	UniParc:UPI0001B16BF7	UniProt:C6TEJ2
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:24166910..24169387

Molecular Weight (calculated)

45316.6 Da

IEP (calculated)

5.577

GRAVY (calculated)

-0.690

Length

403 amino acids

Sequence
(BLAST)

001: MGKKLDALLG RTFKVSKFKA IVNLAISRLA VLKNQRQARL RHARSDVLEL LQLGHQERAS LRVEHVIKDQ NMLDVYGRIE GYFNLLIERV HLIEQERECP
101: EELKEAASGL LYAASRCGDF PEIQQIRVIL TSRFGKEFAA RSIELRNNCG VHPQMIQKLS TKMPSLESRM KVLKDIASEN GIVLQLEETS VSVEEQSSVE
201: KQNQHEPEKK EENVSILPSR GKDEKLIDSY KGRKTYKDVA DAAQAAFESA EYAAAAARAA LELSRSESHD PDDHDSTRLQ PRKVEEGHDV RPQMEEKEIL
301: SETQREDELK KSKDIISCNS TDEVLKGATA LVDGEIEADP LEKEVIFDDS DDENDNKQNI NQSSKQTSSG YGAGIVVNTV PGSKMQNAPQ LDLQKRPISV
401: RTR

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.