CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033714_P001	Maize	mitochondrion	89.77	87.46
Os03t0710000-01	Rice	plasma membrane	67.25	64.79
TraesCS4D01G044800.1	Wheat	mitochondrion	60.23	59.54
TraesCS4B01G044800.1	Wheat	mitochondrion	57.31	58.33
TraesCS4A01G269300.1	Wheat	mitochondrion	59.06	57.06
TraesCS4B01G045100.1	Wheat	mitochondrion	58.77	56.94
TraesCS4D01G044400.1	Wheat	mitochondrion	58.19	56.53
VIT_14s0006g03050.t01	Wine grape	mitochondrion	22.22	48.72
EER92528	Sorghum	mitochondrion	24.27	44.62
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	45.91	36.85
Solyc02g085830.2.1	Tomato	mitochondrion	22.22	36.54
PGSC0003DMT400032944	Potato	mitochondrion	21.93	36.06
KRH45249	Soybean	mitochondrion	40.06	34.6
OQU90964	Sorghum	mitochondrion	16.67	34.13
Solyc05g009550.2.1	Tomato	mitochondrion	42.4	33.96
KRH75395	Soybean	mitochondrion	39.77	33.75
GSMUA_Achr10P...	Banana	mitochondrion	46.78	33.06
PGSC0003DMT400033769	Potato	mitochondrion	41.23	33.02
GSMUA_Achr6P24100_001	Banana	mitochondrion	47.08	32.92
CDY50176	Canola	mitochondrion	35.67	30.96
CDY21093	Canola	mitochondrion	35.38	30.63
CDY19375	Canola	mitochondrion	35.38	29.66
AT1G13340.1	Thale cress	mitochondrion	35.09	29.34
VIT_01s0011g03330.t01	Wine grape	mitochondrion	39.77	29.06
KXG19452	Sorghum	mitochondrion	21.64	26.91
KXG33152	Sorghum	mitochondrion	24.27	25.86
Bra019826.1-P	Field mustard	mitochondrion	35.96	24.9
EER92527	Sorghum	mitochondrion, plastid	37.72	24.07
KRH46919	Soybean	mitochondrion	27.78	23.17
KRH01764	Soybean	mitochondrion	28.36	21.95
EER99304	Sorghum	plastid	26.9	19.17
KXG24567	Sorghum	cytosol, plastid	27.49	18.22
Bra016733.1-P	Field mustard	mitochondrion	35.38	16.2
EES04550	Sorghum	nucleus	17.54	8.78
KXG20673	Sorghum	cytosol, nucleus, plastid	15.79	6.88
EES03498	Sorghum	nucleus, plastid	24.27	6.71

Protein Annotations

EnsemblPlants:EER93588	EnsemblPlantsGene:SORBI_3001G118900	EntrezGene:8062916	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	ProteinID:EER93588
ProteinID:EER93588.1	RefSeq:XP_002466590.1	SEG:seg	unigene:Sbi.2514	UniParc:UPI0001A828A8	UniProt:C5WN50
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9255722..9257487

Molecular Weight (calculated)

37432.3 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.574

Length

342 amino acids

Sequence
(BLAST)

001: MGRRLDVLLG RTTKQTARLK SLLGLAVTRL GVVRGHRQVR CGQARGDVEQ LLRLGHTDRA LARAEHVVRE QNALDVLAEL EAYCALIVER AALVDAHREC
101: PEELREAAAG IVYAAARCGD LPELQEVRGI LAAKFGREFV SAASNLRSGC GINAKIVQKL STKQPSLESR QLVLQEIAAE KGITVRIYEP PCDDSGRSNH
201: NHRKTKHGDE RISRTAPVDD RDEDISGDSA QRYKDVEAAA QAAFESAASA AAAAKAAMEL SRGEPRGPGD RRRMQMDPEI EKQDEVLDGR RSEKIGLDRN
301: CSSEVEIVPE DEANHGNVAV NELKQQEPAK GKPASVRTKW GF

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.