Factsheet for TraesCS4A01G269300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G044800.1	Wheat	mitochondrion	91.53	93.64
TraesCS4B01G045100.1	Wheat	mitochondrion	92.09	92.35
TraesCS4B01G044800.1	Wheat	mitochondrion	86.44	91.07
TraesCS4D01G044400.1	Wheat	mitochondrion	85.31	85.8
Zm00001d033714_P001	Maize	mitochondrion	59.04	59.54
Os03t0710000-01	Rice	plasma membrane	59.6	59.44
EER93588	Sorghum	mitochondrion	57.06	59.06
VIT_14s0006g03050.t01	Wine grape	mitochondrion	22.03	50.0
TraesCS4A01G084900.2	Wheat	mitochondrion	22.6	44.2
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	40.96	34.04
Solyc02g085830.2.1	Tomato	mitochondrion	19.77	33.65
PGSC0003DMT400032944	Potato	mitochondrion	19.49	33.17
KRH45249	Soybean	mitochondrion	36.72	32.83
Solyc05g009550.2.1	Tomato	mitochondrion	38.7	32.08
TraesCS4A01G084800.1	Wheat	mitochondrion	25.14	31.56
KRH75395	Soybean	mitochondrion	35.88	31.51
GSMUA_Achr10P...	Banana	mitochondrion	42.94	31.41
GSMUA_Achr6P24100_001	Banana	mitochondrion	42.66	30.88
PGSC0003DMT400033769	Potato	mitochondrion	37.01	30.68
CDY21093	Canola	mitochondrion	33.62	30.13
CDY50176	Canola	mitochondrion	33.33	29.95
VIT_01s0011g03330.t01	Wine grape	mitochondrion	39.55	29.91
CDY19375	Canola	mitochondrion	33.05	28.68
AT1G13340.1	Thale cress	mitochondrion	32.2	27.87
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	23.45	26.02
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	37.01	24.49
Bra019826.1-P	Field mustard	mitochondrion	33.9	24.29
KRH46919	Soybean	mitochondrion	25.14	21.71
KRH01764	Soybean	mitochondrion	25.42	20.36
TraesCS5A01G346800.1	Wheat	plastid	25.71	18.76
TraesCS3A01G459100.1	Wheat	cytosol, plastid	25.99	17.9
Bra016733.1-P	Field mustard	mitochondrion	33.62	15.93
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	16.1	7.97
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	15.25	7.62
TraesCS3A01G252800.1	Wheat	cytosol	22.6	7.16

Protein Annotations

EnsemblPlants:TraesCS4A01G269300.1	EnsemblPlantsGene:TraesCS4A01G269300	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr4A:-:581200222..581201286

Molecular Weight (calculated)

38697.2 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.711

Length

354 amino acids

Sequence
(BLAST)

001: MGRTLDVLLG RTTKQTARLK SLLHLATKRI AVVRAHREVR CAQARGDVEQ LLRQGHPDRA LLRAEQVIRE RDTLDALLLL DAYCALLADR SALLDDAHRG
101: CPDELREAAA GLCYAAARCG DLPELQEARA LLAARFGRGF ASAAAELRAG CGVNAKLVQR LSTALPSLES RQMVLLEIGA DKDIPVRLHG HAADSYEDPA
201: GRSHHGHGHG HRKKRLDDDD DDERRHATPR ADEPEGDKAA TKLTFKDVEE AAQAAFESAA TAAAAAKAAI ELSRAGSGST DDRHRRNPGR AHADDDEAFH
301: GGEDLADRKT FERIGHVRNY SSESDGEDLP EKKRGEEQDT PRSRPASVRT NRRL

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.