Factsheet for GSMUA_Achr6P24100_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g03050.t01	Wine grape	mitochondrion	20.45	64.1
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	54.81	62.91
GSMUA_Achr10P...	Banana	mitochondrion	59.92	60.54
TraesCS4D01G219500.2	Wheat	mitochondrion	18.4	48.91
TraesCS4B01G219300.1	Wheat	mitochondrion	18.2	48.37
EER92528	Sorghum	mitochondrion	18.2	47.85
Os03t0257500-01	Rice	mitochondrion	18.81	47.67
Solyc02g085830.2.1	Tomato	mitochondrion	20.25	47.6
Os03t0710000-01	Rice	plasma membrane	34.36	47.32
PGSC0003DMT400032944	Potato	mitochondrion	20.04	47.12
EER93588	Sorghum	mitochondrion	32.92	47.08
Zm00001d033714_P001	Maize	mitochondrion	33.74	47.01
TraesCS4A01G084900.2	Wheat	mitochondrion	17.38	46.96
HORVU4Hr1G062250.1	Barley	mitochondrion	17.18	45.65
Zm00001d034058_P004	Maize	mitochondrion	17.18	44.21
TraesCS4D01G044800.1	Wheat	mitochondrion	31.08	43.93
KRH45249	Soybean	mitochondrion	35.38	43.69
TraesCS4B01G044800.1	Wheat	mitochondrion	29.65	43.15
Zm00001d028457_P001	Maize	mitochondrion	17.59	43.0
Solyc05g009550.2.1	Tomato	mitochondrion	37.42	42.86
TraesCS4B01G045100.1	Wheat	mitochondrion	30.88	42.78
KRH75395	Soybean	mitochondrion	35.17	42.68
TraesCS4A01G269300.1	Wheat	mitochondrion	30.88	42.66
PGSC0003DMT400033769	Potato	mitochondrion	37.22	42.62
TraesCS4D01G044400.1	Wheat	mitochondrion	28.83	40.06
TraesCS4B01G219400.1	Wheat	mitochondrion	21.27	39.39
VIT_01s0011g03330.t01	Wine grape	mitochondrion	36.4	38.03
CDY21093	Canola	mitochondrion	29.65	36.71
Zm00001d034057_P001	Maize	mitochondrion	17.18	36.68
Zm00001d047887_P001	Maize	mitochondrion	18.4	36.14
Zm00001d047885_P001	Maize	mitochondrion	18.4	36.0
Zm00001d047886_P001	Maize	mitochondrion	18.4	36.0
TraesCS4D01G219800.1	Wheat	mitochondrion	20.65	35.94
CDY50176	Canola	mitochondrion	28.63	35.53
TraesCS4A01G084800.1	Wheat	mitochondrion	20.25	35.11
CDY19375	Canola	mitochondrion	29.04	34.8
HORVU4Hr1G062260.2	Barley	plastid	20.25	34.74
OQU90964	Sorghum	mitochondrion	11.86	34.73
AT1G13340.1	Thale cress	mitochondrion	28.43	33.99
KRH46919	Soybean	mitochondrion	25.56	30.49
Bra019826.1-P	Field mustard	mitochondrion	30.06	29.76
KRH01764	Soybean	mitochondrion	26.58	29.41
GSMUA_Achr3P29510_001	Banana	mitochondrion	19.02	28.53
EER92527	Sorghum	mitochondrion, plastid	30.47	27.8
GSMUA_Achr5P23530_001	Banana	nucleus	10.02	27.37
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	29.24	26.73
Zm00001d047884_P001	Maize	cytosol	7.77	26.57
HORVU4Hr1G062110.1	Barley	mitochondrion	29.65	26.46
GSMUA_Achr9P21370_001	Banana	mitochondrion	17.59	26.3
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	29.04	26.3
Zm00001d028456_P001	Maize	mitochondrion	28.43	26.18
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	28.43	25.65
Os03t0257600-01	Rice	mitochondrion	28.22	25.56
GSMUA_Achr3P26880_001	Banana	mitochondrion	19.43	21.99
GSMUA_Achr5P23420_001	Banana	mitochondrion	20.04	20.0
Bra016733.1-P	Field mustard	mitochondrion	29.65	19.41
GSMUA_Achr6P02830_001	Banana	cytosol	21.88	18.2
GSMUA_Achr6P29590_001	Banana	cytosol	12.07	12.88
GSMUA_Achr8P15690_001	Banana	mitochondrion	13.09	9.55
GSMUA_Achr1P14380_001	Banana	nucleus	23.31	9.16
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	12.47	9.06

Protein Annotations

EnsemblPlants:GSMUA_Achr6P24100_001	EnsemblPlants:GSMUA_Achr6T24100_001	EnsemblPlantsGene:GSMUA_Achr6G24100_001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg
UniParc:UPI0002958518	UniProt:M0T9Q8	MapMan:35.2	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G24100_001]

Coordinates

chr6:+:24481640..24484091

Molecular Weight (calculated)

54697.7 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.788

Length

489 amino acids

Sequence
(BLAST)

001: MGRKLDILLG RTSRQTSKLK TFLGLTVSRL AVLRNHRQVR RDQARGDVVQ LLQLGHVDRA LLRVEHVIKE QNMLDVFVMI EHYCHLLTER APLLDRKECP
101: EELREAISSL VFAASRCAEL PELDKARGIF SSRYGKELVS AAVELRNNCC VDPKMIQKLS TRQPSLEIRH RVIKEIAAEI GIKLEFSESS ETAEGNSMVS
201: PPTHLNLEQL ESDDNPAFRS HQKYDDVASA AQAAFESAAF AAAAARAAVE LCRSESQEKG SADESKAGSQ KRSDINGSES VEIENSADSK NFEKIHHDQN
301: SGSDSDEGMK AKQDDLLHKE RIRERFEMQL QRSSSSISDA SDEDNAGSSE QHSAGFRGKN ILFDESDNEE EKDRGLGTNL PYASHEELSP AGRIGYVVQA
401: QRQFDASLDD SKPGKHQIYY RRNETRNSEM NNNSLHEETH KVGSRSGTES NYSTYNNAEK TYLDSSSTMR PLNLSSGKKP ISVRTRRGL

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.