Factsheet for Zm00001d034057_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034058_P004	Maize	mitochondrion	78.6	94.74
Zm00001d028457_P001	Maize	mitochondrion	59.39	68.0
OQU90964	Sorghum	mitochondrion	49.34	67.66
Os03t0257500-01	Rice	mitochondrion	55.46	65.8
HORVU4Hr1G062250.1	Barley	mitochondrion	52.84	65.76
TraesCS4A01G084900.2	Wheat	mitochondrion	51.09	64.64
TraesCS4D01G219500.2	Wheat	mitochondrion	51.53	64.13
TraesCS4B01G219300.1	Wheat	mitochondrion	50.66	63.04
Zm00001d047886_P001	Maize	mitochondrion	61.57	56.4
Zm00001d047885_P001	Maize	mitochondrion	60.7	55.6
Zm00001d047887_P001	Maize	mitochondrion	60.26	55.42
TraesCS4B01G219400.1	Wheat	mitochondrion	61.57	53.41
TraesCS4D01G219800.1	Wheat	mitochondrion	61.57	50.18
TraesCS4A01G084800.1	Wheat	mitochondrion	61.14	49.65
HORVU4Hr1G062260.2	Barley	plastid	61.14	49.12
Zm00001d047884_P001	Maize	cytosol	26.2	41.96
VIT_14s0006g03050.t01	Wine grape	mitochondrion	25.76	37.82
Solyc02g085830.2.1	Tomato	mitochondrion	25.76	28.37
PGSC0003DMT400032944	Potato	mitochondrion	25.33	27.88
Zm00001d052541_P001	Maize	extracellular	17.03	27.08
Zm00001d033714_P001	Maize	mitochondrion	37.12	24.22
Zm00001d028142_P001	Maize	cytosol	10.48	24.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	10.04	23.0
Zm00001d028456_P001	Maize	mitochondrion	51.53	22.22
KRH45249	Soybean	mitochondrion	31.44	18.18
KRH75395	Soybean	mitochondrion	31.88	18.11
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	33.62	18.08
Zm00001d043813_P001	Maize	mitochondrion	25.33	18.07
KRH46919	Soybean	mitochondrion	31.88	17.8
Solyc05g009550.2.1	Tomato	mitochondrion	32.75	17.56
PGSC0003DMT400033769	Potato	mitochondrion	32.31	17.33
GSMUA_Achr6P24100_001	Banana	mitochondrion	36.68	17.18
KRH01764	Soybean	mitochondrion	32.75	16.97
CDY21093	Canola	mitochondrion	29.26	16.96
CDY50176	Canola	mitochondrion	28.82	16.75
AT1G13340.1	Thale cress	mitochondrion	29.69	16.63
CDY19375	Canola	mitochondrion	29.26	16.42
GSMUA_Achr10P...	Banana	mitochondrion	34.06	16.12
VIT_01s0011g03330.t01	Wine grape	mitochondrion	29.69	14.53
Bra019826.1-P	Field mustard	mitochondrion	28.82	13.36
Zm00001d021453_P002	Maize	plastid	26.2	11.47
Zm00001d049479_P003	Maize	cytosol, mitochondrion, plastid	24.89	10.44
Zm00001d024425_P003	Maize	cytosol	24.02	9.7
Bra016733.1-P	Field mustard	mitochondrion	29.26	8.97
Zm00001d053852_P001	Maize	nucleus	22.71	7.59
Zm00001d014521_P001	Maize	mitochondrion	20.52	6.1
Zm00001d011684_P002	Maize	nucleus, plastid	22.71	4.29
Zm00001d036913_P001	Maize	cytosol	10.92	4.09
Zm00001d051744_P001	Maize	nucleus	1.31	0.6

Protein Annotations

EnsemblPlants:Zm00001d034057_P001	EnsemblPlants:Zm00001d034057_T001	EnsemblPlantsGene:Zm00001d034057	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF26	PFAM:PF03398	ProteinID:ONM09463.1
SEG:seg	UniParc:UPI0008443251	UniProt:A0A1D6L541	MapMan:35.2	:	:

Description

Regulator of Vps4 activity in the MVB pathway protein

Coordinates

chr1:+:282650778..282651943

Molecular Weight (calculated)

25917.7 Da

IEP (calculated)

8.759

GRAVY (calculated)

-0.224

Length

229 amino acids

Sequence
(BLAST)

001: MGFFQGKTSK QTARVKKLLG LALSRLAIAR RPRLARRSIY RSDVGQLLSL GYLHRALLRA ERVIEEDNML QAFDIIELCC KRLVEHAAHL DKPRECGEEI
101: REAAAGIMFA ARWCGDLPEL QVARTILEDK FGSDMAVIAK EGTSIVDPML VWKLSGDKTN MELKKKVTKE IAVENSFMVD FSELQLQKCH TRISGHKDPG
201: ANIINRCAGT KSHTCDESWY RIECHIFTI

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.