Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19452 | Sorghum | mitochondrion | 78.47 | 41.09 |
| Zm00001d043813_P001 | Maize | mitochondrion | 84.72 | 38.01 |
| Os01t0687700-01 | Rice | mitochondrion, plasma membrane | 82.64 | 37.3 |
| TraesCS3D01G263400.1 | Wheat | mitochondrion, plastid | 81.25 | 36.68 |
| TraesCS3A01G263500.1 | Wheat | mitochondrion, plastid | 81.25 | 36.68 |
| TraesCS3B01G296700.1 | Wheat | mitochondrion, plastid | 80.56 | 36.36 |
| HORVU3Hr1G063860.1 | Barley | plastid | 79.86 | 31.68 |
| GSMUA_Achr3P29510_001 | Banana | mitochondrion | 70.83 | 31.29 |
| GSMUA_Achr9P21370_001 | Banana | mitochondrion | 70.14 | 30.89 |
| KRG90825 | Soybean | mitochondrion | 69.44 | 30.86 |
| KRH35947 | Soybean | mitochondrion | 69.44 | 30.86 |
| VIT_01s0011g03610.t01 | Wine grape | mitochondrion | 69.44 | 30.4 |
| Solyc04g007230.2.1 | Tomato | mitochondrion | 68.06 | 30.34 |
| Bra012478.1-P | Field mustard | mitochondrion | 64.58 | 28.79 |
| CDY53122 | Canola | mitochondrion | 64.58 | 28.79 |
| CDY58595 | Canola | mitochondrion | 64.58 | 28.79 |
| AT1G25420.1 | Thale cress | mitochondrion | 63.89 | 28.48 |
| Zm00001d028457_P001 | Maize | mitochondrion | 31.94 | 23.0 |
| Zm00001d034058_P004 | Maize | mitochondrion | 27.78 | 21.05 |
| Zm00001d047884_P001 | Maize | cytosol | 20.14 | 20.28 |
| Zm00001d047885_P001 | Maize | mitochondrion | 29.86 | 17.2 |
| Zm00001d034057_P001 | Maize | mitochondrion | 27.08 | 17.03 |
| Zm00001d047887_P001 | Maize | mitochondrion | 29.17 | 16.87 |
| Zm00001d047886_P001 | Maize | mitochondrion | 29.17 | 16.8 |
| Zm00001d049479_P003 | Maize | cytosol, mitochondrion, plastid | 55.56 | 14.65 |
| Zm00001d024425_P003 | Maize | cytosol | 56.25 | 14.29 |
| Zm00001d021453_P002 | Maize | plastid | 47.92 | 13.19 |
| Zm00001d033714_P001 | Maize | mitochondrion | 31.25 | 12.82 |
| Zm00001d028142_P001 | Maize | cytosol | 6.25 | 9.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 6.25 | 9.0 |
| Zm00001d028456_P001 | Maize | mitochondrion | 29.17 | 7.91 |
| Zm00001d053852_P001 | Maize | nucleus | 28.47 | 5.99 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 44.44 | 5.28 |
| Zm00001d014521_P001 | Maize | mitochondrion | 26.39 | 4.93 |
| Zm00001d036913_P001 | Maize | cytosol | 13.89 | 3.27 |
| Zm00001d051744_P001 | Maize | nucleus | 3.47 | 1.0 |
Protein Annotations
| EnsemblPlants:Zm00001d052541_P001 | EnsemblPlants:Zm00001d052541_T001 | EnsemblPlantsGene:Zm00001d052541 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF28 | PFAM:PF03398 | ProteinID:AQK57400.1 |
| UniParc:UPI000842A32C | UniProt:A0A1D6QHQ4 | MapMan:35.2 | : | : | : |
Description
Regulator of Vps4 activity in the MVB pathway protein
Coordinates
chr4:-:192585144..192585767
Molecular Weight (calculated)
16169.5 Da
IEP (calculated)
4.400
GRAVY (calculated)
0.136
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQNILAAYE ILELFCEFVL AKVPSVEVQK ECPIELCEAI ASIIFASGRC SDLPELMHLH NLFTTKYGKE FVASAMELCP DSSVNRIIIE KLSVNAPSDG
101: SKLKVMKAIA QEYNFEWDSS NTEAEFSKKF EDLLVAFANR LLIP
101: SKLKVMKAIA QEYNFEWDSS NTEAEFSKKF EDLLVAFANR LLIP
001: MNLWAAYEIL ELFCEFILAR VPILESEKEC PRELREAIAS IIFAAPRCSE VPDLLQIKNL FGTKYGKEFI MVASELRPDS GVNRTIIEKL SPTSPSGAAR
101: LKMLKEIAQE YSLNWDSSAT EAEFMKSHED LLGGAKQIHR QDGISESRPS QQGYGQSSVS REVESLPAEA TQRFQKLQAQ NPVSKSMPSS KLTSAFQAPP
201: DTRRNQTDVM EIARAALASA DRATAAARAA AQLVNVSYGA TTPTVAAEGK PLNLM
101: LKMLKEIAQE YSLNWDSSAT EAEFMKSHED LLGGAKQIHR QDGISESRPS QQGYGQSSVS REVESLPAEA TQRFQKLQAQ NPVSKSMPSS KLTSAFQAPP
201: DTRRNQTDVM EIARAALASA DRATAAARAA AQLVNVSYGA TTPTVAAEGK PLNLM
Arabidopsis Description
At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.