Factsheet for Zm00001d047887_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047885_P001	Maize	mitochondrion	95.58	95.2
Zm00001d047886_P001	Maize	mitochondrion	95.18	94.8
Zm00001d047884_P001	Maize	cytosol	53.41	93.01
Zm00001d028457_P001	Maize	mitochondrion	67.47	84.0
Zm00001d034058_P004	Maize	mitochondrion	54.62	71.58
Os03t0257500-01	Rice	mitochondrion	49.4	63.73
TraesCS4A01G084900.2	Wheat	mitochondrion	45.38	62.43
TraesCS4D01G219500.2	Wheat	mitochondrion	45.38	61.41
HORVU4Hr1G062250.1	Barley	mitochondrion	44.98	60.87
Zm00001d034057_P001	Maize	mitochondrion	55.42	60.26
TraesCS4B01G219300.1	Wheat	mitochondrion	44.18	59.78
TraesCS4B01G219400.1	Wheat	mitochondrion	62.65	59.09
TraesCS4D01G219800.1	Wheat	mitochondrion	63.86	56.58
TraesCS4A01G084800.1	Wheat	mitochondrion	63.86	56.38
HORVU4Hr1G062260.2	Barley	plastid	63.86	55.79
VIT_14s0006g03050.t01	Wine grape	mitochondrion	24.9	39.74
Zm00001d052541_P001	Maize	extracellular	16.87	29.17
PGSC0003DMT400032944	Potato	mitochondrion	24.1	28.85
Solyc02g085830.2.1	Tomato	mitochondrion	24.1	28.85
Zm00001d033714_P001	Maize	mitochondrion	35.34	25.07
Zm00001d028456_P001	Maize	mitochondrion	52.61	24.67
Zm00001d028142_P001	Maize	cytosol	8.84	22.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	8.43	21.0
KRH75395	Soybean	mitochondrion	32.53	20.1
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	33.73	19.72
KRH45249	Soybean	mitochondrion	31.33	19.7
Zm00001d043813_P001	Maize	mitochondrion	24.5	19.0
Solyc05g009550.2.1	Tomato	mitochondrion	31.73	18.5
PGSC0003DMT400033769	Potato	mitochondrion	31.73	18.5
CDY21093	Canola	mitochondrion	29.32	18.48
GSMUA_Achr6P24100_001	Banana	mitochondrion	36.14	18.4
KRH46919	Soybean	mitochondrion	30.12	18.29
CDY50176	Canola	mitochondrion	28.92	18.27
KRH01764	Soybean	mitochondrion	32.13	18.1
AT1G13340.1	Thale cress	mitochondrion	29.32	17.85
CDY19375	Canola	mitochondrion	28.92	17.65
GSMUA_Achr10P...	Banana	mitochondrion	32.53	16.74
VIT_01s0011g03330.t01	Wine grape	mitochondrion	30.52	16.24
Bra019826.1-P	Field mustard	mitochondrion	29.72	14.98
Zm00001d021453_P002	Maize	plastid	24.5	11.66
Zm00001d049479_P003	Maize	cytosol, mitochondrion, plastid	23.69	10.81
Zm00001d024425_P003	Maize	cytosol	23.69	10.41
Bra016733.1-P	Field mustard	mitochondrion	29.32	9.77
Zm00001d053852_P001	Maize	nucleus	21.69	7.88
Zm00001d014521_P001	Maize	mitochondrion	20.08	6.49
Zm00001d011684_P002	Maize	nucleus, plastid	21.69	4.46
Zm00001d036913_P001	Maize	cytosol	8.84	3.6
Zm00001d051744_P001	Maize	nucleus	1.61	0.8

Protein Annotations

EnsemblPlants:Zm00001d047887_P001	EnsemblPlants:Zm00001d047887_T001	EnsemblPlantsGene:Zm00001d047887	EntrezGene:103639343	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF26	PFAM:PF03398
ProteinID:AQL07917.1	SEG:seg	UniParc:UPI000221B5EF	UniProt:K7VNC9	MapMan:35.2	:

Description

Regulator of Vps4 activity in the MVB pathway protein

Coordinates

chr9:+:144328784..144330425

Molecular Weight (calculated)

27402.5 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.533

Length

249 amino acids

Sequence
(BLAST)

001: MGFIQGRTSK QTSRVKTLLR LALSRLAAAR RPRLARKSIS RSDVGQLLAL GHIDRALHRA EQLIEEDNML EAFNIIELHC NRLIECAKQL DKPHECGEDI
101: REAAAGIMFA AGRCGDLPEL TFARTILANK FEGEFAAMAK EGAGVVDPML VWKLTGNKGD MELKKKVVKE VAAENNVLVD FSELQEVEHG GSGNGNVPHH
201: HNVSHEGIYQ TDMDGSSEPS HECDTSNSDG ASNGHPKQEN TRTSVRTRR

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.