Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028142_P001 | Maize | cytosol | 8.18 | 99.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 8.09 | 98.0 |
| EES03498 | Sorghum | nucleus, plastid | 81.59 | 79.87 |
| CDY04642 | Canola | cytosol | 6.94 | 56.0 |
| Os01t0706400-01 | Rice | plasma membrane | 50.78 | 55.86 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 51.28 | 55.6 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 50.7 | 55.27 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 50.21 | 54.38 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 52.35 | 53.59 |
| TraesCS3B01G288900.2 | Wheat | plastid | 50.95 | 53.56 |
| Zm00001d052541_P001 | Maize | extracellular | 5.28 | 44.44 |
| Zm00001d043813_P001 | Maize | mitochondrion | 10.32 | 38.94 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 15.94 | 33.22 |
| Zm00001d021453_P002 | Maize | plastid | 13.38 | 30.98 |
| Zm00001d049479_P003 | Maize | cytosol, mitochondrion, plastid | 12.88 | 28.57 |
| Zm00001d024425_P003 | Maize | cytosol | 13.38 | 28.57 |
| KRH49036 | Soybean | mitochondrion | 23.95 | 27.54 |
| CDX82713 | Canola | mitochondrion | 20.89 | 27.53 |
| CDY35879 | Canola | mitochondrion | 20.73 | 27.37 |
| Bra039012.1-P | Field mustard | mitochondrion | 20.73 | 27.37 |
| KRH74171 | Soybean | mitochondrion | 24.03 | 27.35 |
| Zm00001d028457_P001 | Maize | mitochondrion | 4.46 | 27.0 |
| Zm00001d034058_P004 | Maize | mitochondrion | 4.21 | 26.84 |
| KRH41442 | Soybean | cytosol | 9.74 | 26.46 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 20.4 | 26.36 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 22.13 | 24.7 |
| Bra011109.1-P | Field mustard | mitochondrion | 18.66 | 24.57 |
| Solyc07g032230.2.1 | Tomato | nucleus | 21.72 | 24.51 |
| Zm00001d033714_P001 | Maize | mitochondrion | 7.02 | 24.22 |
| CDY43502 | Canola | mitochondrion | 18.5 | 23.96 |
| Zm00001d034057_P001 | Maize | mitochondrion | 4.29 | 22.71 |
| AT4G29440.1 | Thale cress | mitochondrion | 19.74 | 21.93 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 22.38 | 21.77 |
| Zm00001d047887_P001 | Maize | mitochondrion | 4.46 | 21.69 |
| Zm00001d047885_P001 | Maize | mitochondrion | 4.46 | 21.6 |
| Zm00001d047886_P001 | Maize | mitochondrion | 4.46 | 21.6 |
| Zm00001d047884_P001 | Maize | cytosol | 2.23 | 18.88 |
| Zm00001d028456_P001 | Maize | mitochondrion | 7.27 | 16.57 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 15.85 | 16.29 |
| Zm00001d053852_P001 | Maize | nucleus | 7.51 | 13.28 |
| Zm00001d014521_P001 | Maize | mitochondrion | 7.02 | 11.02 |
| Zm00001d036913_P001 | Maize | cytosol | 2.89 | 5.73 |
| Zm00001d051744_P001 | Maize | nucleus | 1.65 | 3.98 |
Protein Annotations
| EnsemblPlants:Zm00001d011684_P002 | EnsemblPlants:Zm00001d011684_T002 | EnsemblPlantsGene:Zm00001d011684 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 |
| ProteinID:AQK97730.1 | SEG:seg | UniParc:UPI0008446607 | UniProt:A0A1D6G2Y6 | MapMan:35.2 | : |
Description
Regulator of Vps4 activity in the MVB pathway protein
Coordinates
chr8:+:158588724..158594994
Molecular Weight (calculated)
133078.0 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.891
Length
1211 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAGSGPTDN AQAKRRGRPI LPLPCIARTD STPSNQKAIQ LLPSAKSLLL LPSPCSVPLG SRRQRQPAPS RVRESPNLSI FQSTAAATKG SPPSPPRWRL
0101: AGIWCRARFG FGWIRIRPED TGPCRAAGAE MHKSKGKFSG VLHKGFKPDK CKTSLRMAVA RIKLLRNRKE VQVRQMRREV AQLLEANQDM TARIRVEHVI
0201: REEKFMQAYD LIEVYCELIV ARLSIIDSQK TCPIDLKEAV ASVIFASMRC SDVTELADVR KHFKSKYGKE FEAAALEVRP DSGVNRLIIE KLSAGAPDVQ
0301: TKIKTLSSIA EEHNIKWEPK AFEEKLQQPT EGHLYGSATY SGGNTSTMGS STSSISTPQP TYSGVSAAPV DSATIHVPAN KTAYGSANSN TFSKESIHNS
0401: SSASVPPISQ HGPSAYSSAQ VPGSNNISHG NPGGPPYPQY SATVPDAVSR NEDSNQNRER KPLVTGANWN VEFKDATSAA QAAAESAEMA SIAARAAAEL
0501: ASRGNYSGDK GTGAYDSAAY SSKNTVRKQR AEHVVKDESF HDQSSGVNDP SEMPSNSRNF FGGTETSHVD SENISTAPYQ QFHAYNPDSH PYVYEMPTEP
0601: PRAHSPDPRF DDLYERESDI GRSEVDPFDF PRENFQDTAS VGHNFKDVEI RTPSYDQEST DDYYGNFNSS HDTLAHGSST TAWDKQNDKA QDNSSPVVFD
0701: QYDSDVEQEN LLDTFSSKHT EQLPAPGDHM RFSTADWSEQ HTSESPSKQR TSALFSRTET QLSDNLGTNK SDIPSPHSYH NMRPAFDSDG GSSDEEIATT
0801: THAVPLRSHS GGSASSVLNK GGGPDASPIF DYSGAHAVRN LNRVQSRDSD LSEEETDLDK FKGSSFARAN EQQLLPSAIR TSATSDDKED DISLNFGKLT
0901: PGLRNKPRQP PPYTKVSRES ILPKQSLPKV SAGTEESVDS EENTTFKQDR SSPQSSFSAR TSSGKDYDSG LYERNRSVGT HWEAKSTIAR NSSGLDDAEK
1001: LSDLPTNISL PTTKSSERWN SSKVPYHEKP GIGTRREVRS TLARNYFDSD DSEEELEQQQ IPQSKQSGVL IQSRRTREVT SDTKRDGRFQ TGAQYGDETE
1101: SVTSKTQVHQ GFNSSSTERS ERRDPSVYPR VAVQRSSSKA EQIESPMERG KPQGAEMRST LFRGNEEDTE TSSGTPKEST PKTPPAHVHP KLPTDYDSFA
1201: AHFRSLRTNR P
0101: AGIWCRARFG FGWIRIRPED TGPCRAAGAE MHKSKGKFSG VLHKGFKPDK CKTSLRMAVA RIKLLRNRKE VQVRQMRREV AQLLEANQDM TARIRVEHVI
0201: REEKFMQAYD LIEVYCELIV ARLSIIDSQK TCPIDLKEAV ASVIFASMRC SDVTELADVR KHFKSKYGKE FEAAALEVRP DSGVNRLIIE KLSAGAPDVQ
0301: TKIKTLSSIA EEHNIKWEPK AFEEKLQQPT EGHLYGSATY SGGNTSTMGS STSSISTPQP TYSGVSAAPV DSATIHVPAN KTAYGSANSN TFSKESIHNS
0401: SSASVPPISQ HGPSAYSSAQ VPGSNNISHG NPGGPPYPQY SATVPDAVSR NEDSNQNRER KPLVTGANWN VEFKDATSAA QAAAESAEMA SIAARAAAEL
0501: ASRGNYSGDK GTGAYDSAAY SSKNTVRKQR AEHVVKDESF HDQSSGVNDP SEMPSNSRNF FGGTETSHVD SENISTAPYQ QFHAYNPDSH PYVYEMPTEP
0601: PRAHSPDPRF DDLYERESDI GRSEVDPFDF PRENFQDTAS VGHNFKDVEI RTPSYDQEST DDYYGNFNSS HDTLAHGSST TAWDKQNDKA QDNSSPVVFD
0701: QYDSDVEQEN LLDTFSSKHT EQLPAPGDHM RFSTADWSEQ HTSESPSKQR TSALFSRTET QLSDNLGTNK SDIPSPHSYH NMRPAFDSDG GSSDEEIATT
0801: THAVPLRSHS GGSASSVLNK GGGPDASPIF DYSGAHAVRN LNRVQSRDSD LSEEETDLDK FKGSSFARAN EQQLLPSAIR TSATSDDKED DISLNFGKLT
0901: PGLRNKPRQP PPYTKVSRES ILPKQSLPKV SAGTEESVDS EENTTFKQDR SSPQSSFSAR TSSGKDYDSG LYERNRSVGT HWEAKSTIAR NSSGLDDAEK
1001: LSDLPTNISL PTTKSSERWN SSKVPYHEKP GIGTRREVRS TLARNYFDSD DSEEELEQQQ IPQSKQSGVL IQSRRTREVT SDTKRDGRFQ TGAQYGDETE
1101: SVTSKTQVHQ GFNSSSTERS ERRDPSVYPR VAVQRSSSKA EQIESPMERG KPQGAEMRST LFRGNEEDTE TSSGTPKEST PKTPPAHVHP KLPTDYDSFA
1201: AHFRSLRTNR P
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.