Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028142_P001 | Maize | cytosol | 5.43 | 64.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 5.34 | 63.0 |
| CDY04642 | Canola | cytosol | 7.04 | 55.33 |
| VIT_14s0006g03050.t01 | Wine grape | mitochondrion | 5.26 | 39.74 |
| VIT_00s1235g00010.t01 | Wine grape | mitochondrion | 11.37 | 38.51 |
| VIT_01s0011g03610.t01 | Wine grape | mitochondrion | 10.09 | 36.17 |
| VIT_18s0164g00040.t01 | Wine grape | nucleus | 15.01 | 32.84 |
| VIT_00s0302g00010.t01 | Wine grape | endoplasmic reticulum | 9.33 | 30.47 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.84 | 30.12 |
| VIT_12s0059g01700.t01 | Wine grape | golgi | 5.77 | 29.18 |
| KRH41442 | Soybean | cytosol | 9.75 | 25.78 |
| KRH49036 | Soybean | mitochondrion | 18.58 | 20.8 |
| KRH74171 | Soybean | mitochondrion | 18.41 | 20.39 |
| VIT_01s0011g03330.t01 | Wine grape | mitochondrion | 8.06 | 20.3 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 18.49 | 20.09 |
| Solyc07g032230.2.1 | Tomato | nucleus | 18.15 | 19.94 |
| Bra039012.1-P | Field mustard | mitochondrion | 15.27 | 19.63 |
| CDY35879 | Canola | mitochondrion | 15.27 | 19.63 |
| CDX82713 | Canola | mitochondrion | 15.1 | 19.37 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 15.35 | 19.32 |
| Os01t0706400-01 | Rice | plasma membrane | 17.39 | 18.62 |
| Bra011109.1-P | Field mustard | mitochondrion | 14.25 | 18.26 |
| CDY43502 | Canola | mitochondrion | 14.25 | 17.97 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 16.71 | 17.73 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 16.62 | 17.55 |
| TraesCS3B01G288900.2 | Wheat | plastid | 16.79 | 17.19 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 16.12 | 16.99 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 16.79 | 16.74 |
| VIT_09s0002g04580.t01 | Wine grape | nucleus | 7.04 | 16.57 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 16.29 | 15.85 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 16.54 | 15.66 |
| EES03498 | Sorghum | nucleus, plastid | 16.37 | 15.6 |
| AT4G29440.1 | Thale cress | mitochondrion | 14.33 | 15.5 |
| VIT_11s0016g04010.t01 | Wine grape | nucleus | 7.72 | 12.53 |
Protein Annotations
| Gene3D:1.20.1260.60 | EntrezGene:100256064 | wikigene:100256064 | MapMan:35.2 | ProteinID:CBI27947 | ProteinID:CBI27947.3 |
| ncoils:Coil | UniProt:D7TBB2 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008171 | GO:GO:0015031 | GO:GO:0016740 | GO:GO:0032259 |
| InterPro:Ist1 | EntrezGene:LOC100256064 | wikigene:LOC100256064 | PFAM:PF03398 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 |
| UniParc:UPI0001984220 | ArrayExpress:VIT_11s0016g02580 | EnsemblPlantsGene:VIT_11s0016g02580 | EnsemblPlants:VIT_11s0016g02580.t01 | unigene:Vvi.25881 | RefSeq:XP_002279892 |
| RefSeq:XP_002279892.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:2064212..2071205
Molecular Weight (calculated)
130472.0 Da
IEP (calculated)
6.314
GRAVY (calculated)
-1.034
Length
1179 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLHRSFKPAK CKTSLKLAVS RIKLLKNRRE AQLKQMKRDL AQLLQSGQDQ TARIRVEHVV REEKTMAAYD LIEVYCEMIA ARLPIIESQK NCPIDLKEAI
0101: TSIIFASPRC SDIPELMEIR KHFTAKYGKD FISVALELRP ECGVSRNLVE KLSATAPDGQ TKIKILAAIA EEHNIKWEPK SFEENESKPP EVLLSGADTF
0201: EKASKMQMEP PDVQAPLSHG QKPDVPVNLY EHNVRSSQSS HNMSSYNSQN MSSLSSQNIS STDFGANKAT MSGSSPPEPR PSGTVYEEMG FRHSYSENVN
0301: PLSPGRQNWN MEFKDATAAA QAAAESAERA SMAARAAAEL SSRGRVNTQY STESQKSSAF DSRDEGPGKF AGSKFQGEHL SKVSANNSFH DRNPRSQNVQ
0401: MDGNQQDNLE GVSERLYRDG NHRKSSQYSS LKSDPSSIDE VNTGQRSDSY SQRSSSAVEA TKLEKGNFFE QSDKSEVGFL SEHQGGMKNE NVDYSGNARI
0501: KRESSTLSPR SHSSAFGDAY DEISNLSILR SDNDAGENPF AARVVFDEYG SDDNDHKFDV GSKDSEEELN TDFQSLGRKS PTHLSANTSA WSPRQGRSGS
0601: MEKLSSQSDF STEWRFPHDF SEGLIKSNSV APSQPENLLP GTFDDSDGLS SESEKELDEP MFSGRTDPSI IHLNENVHTR DPEPTQSETQ ELEGSSFGEK
0701: GNSRSNRKPW VDSSSDDSDT TVPKRNQRRE FKAESQKKFG FSDVSSPGRL KSVVDQNDLD REPFYNPADE EKHPQSQRSS RLSFVHEVKD KDDFDTKNLP
0801: SIMKSTEVGG LSSWESGKEL NFETLTGGFR NKGYKRPPYV TQPSSNASSL SKPTADDTPP TVQQSVASST PQHSIASTAT QQSTGSSSVK SLASHAVHSQ
0901: EAYNQEARTK VNKKSTSRSR PTYFDSDTDD SEEELPELPQ HSSKKESYNQ KAGVKDNTKL SPIGPITYFG MDDDSEEDIP KPTLTSTGRP TSSFSRRTKA
1001: SSNFETSSYS KSAATYESAT ASNNSAERKT SSRRSHSTET MPNAWSQTMS SGQQERKLSS QRLHATESAP ESQYQTKSPS QQESSEWHRS SEQATHKPMP
1101: EPKTSLEKES SKYPAIEQQS NPVPKTVASG GSESSKPSSS STEPPSRENS IKKASHVHPK LPDYESLAAR FQSLRVNRQ
0101: TSIIFASPRC SDIPELMEIR KHFTAKYGKD FISVALELRP ECGVSRNLVE KLSATAPDGQ TKIKILAAIA EEHNIKWEPK SFEENESKPP EVLLSGADTF
0201: EKASKMQMEP PDVQAPLSHG QKPDVPVNLY EHNVRSSQSS HNMSSYNSQN MSSLSSQNIS STDFGANKAT MSGSSPPEPR PSGTVYEEMG FRHSYSENVN
0301: PLSPGRQNWN MEFKDATAAA QAAAESAERA SMAARAAAEL SSRGRVNTQY STESQKSSAF DSRDEGPGKF AGSKFQGEHL SKVSANNSFH DRNPRSQNVQ
0401: MDGNQQDNLE GVSERLYRDG NHRKSSQYSS LKSDPSSIDE VNTGQRSDSY SQRSSSAVEA TKLEKGNFFE QSDKSEVGFL SEHQGGMKNE NVDYSGNARI
0501: KRESSTLSPR SHSSAFGDAY DEISNLSILR SDNDAGENPF AARVVFDEYG SDDNDHKFDV GSKDSEEELN TDFQSLGRKS PTHLSANTSA WSPRQGRSGS
0601: MEKLSSQSDF STEWRFPHDF SEGLIKSNSV APSQPENLLP GTFDDSDGLS SESEKELDEP MFSGRTDPSI IHLNENVHTR DPEPTQSETQ ELEGSSFGEK
0701: GNSRSNRKPW VDSSSDDSDT TVPKRNQRRE FKAESQKKFG FSDVSSPGRL KSVVDQNDLD REPFYNPADE EKHPQSQRSS RLSFVHEVKD KDDFDTKNLP
0801: SIMKSTEVGG LSSWESGKEL NFETLTGGFR NKGYKRPPYV TQPSSNASSL SKPTADDTPP TVQQSVASST PQHSIASTAT QQSTGSSSVK SLASHAVHSQ
0901: EAYNQEARTK VNKKSTSRSR PTYFDSDTDD SEEELPELPQ HSSKKESYNQ KAGVKDNTKL SPIGPITYFG MDDDSEEDIP KPTLTSTGRP TSSFSRRTKA
1001: SSNFETSSYS KSAATYESAT ASNNSAERKT SSRRSHSTET MPNAWSQTMS SGQQERKLSS QRLHATESAP ESQYQTKSPS QQESSEWHRS SEQATHKPMP
1101: EPKTSLEKES SKYPAIEQQS NPVPKTVASG GSESSKPSSS STEPPSRENS IKKASHVHPK LPDYESLAAR FQSLRVNRQ
0001: MKKVLHRSFK PAKCKIALQM AASRLKILKN KKDTQIKQLR RELAHLLESG QTQTAKIRVE HVVREEKTVA AYELVGIYCE LLVARLGVID SQKTCPNDLK
0101: EAVASVLYAS QRLTDVGELS DIVKHFSAKY GKDFVSAAIG LQPDSGVSRL LVEKLSVKAP DGPTKIKILT EIATQHNVTW EAESLVESDP KETMSASGAS
0201: SSVSQPATGI KSESSRIQNN QPPVFQAAAT VNVSQNSYAT DGRSSSRMTS TDFNVGKTPD HYHQDPKPSG DRVDGREHRD HNPGHGDTSP FETKFVDATS
0301: AARAAAESAE RASFAARRAA ELSSKERMMM MQNSTESRNS SSYENLRSNP PHSRTSSSNM QGGGFGKEEL LKSNNRQVDQ STTTTRAESS KKTVDELSEN
0401: TSWRRGHSRE NSLEMRPNDS FAKIGREKQQ PGMDDINLSS SADVLNKKQS SRASSHSPSS NFSDDNDVTA LDHIDSPSIF EENKFQSTVG DRESYNDSPV
0501: VVVAPAFDDY SSFFDKPQFD TEDAYHDEPE QGLGFSLLGS SSKTSDHMPT EISSWSLEGH KDLGKLSSAS TSQVLEKEKP SSPPTFDDGP TSPPASLHEP
0601: EPSAKFDDYD RDSESEEDNL GRLSGRAEGK SKLTAQKSHM SEGPDDLGRY FFPSDTEDQG DDSKTQEESD AETPTGLKFG PLASGLENET TLPSYGSSPP
0701: RDKTSSKSIK EYLPTEVDPS RSSSLQTASS SSIRNELYTQ KASNSDKRPS SIPPDSSSSD DESDMELPKR VSFRYQEKRT ESRTRPTHLH SGVSHKDLEE
0801: EIPTRASTRS QDRRTHKTTP ASASASYFHT MSSDDEDEKE VHRDTAHIQT RPYISISRRT KGQERRPSLV TAKIDKVSFD EESPPKLSPE AKPLTKQQGS
0901: ASSLSYLPKT EKVSHDQESH PKLGLGAKPL IKQQGSASSL SFLPKTNKAS PDQDSPPKLV PKEKPAAKQR GSASSLSFLP KTDKASPDQD SPPKLLPKEK
1001: PAAKQQGSAT SSSSLPKTEK ISHYRESPSK LTPEAKSMAK QEGLASSSSS LPKTVTSPDP ETPAKEKASH VHPKLPDYDD IFAKLGALRR
0101: EAVASVLYAS QRLTDVGELS DIVKHFSAKY GKDFVSAAIG LQPDSGVSRL LVEKLSVKAP DGPTKIKILT EIATQHNVTW EAESLVESDP KETMSASGAS
0201: SSVSQPATGI KSESSRIQNN QPPVFQAAAT VNVSQNSYAT DGRSSSRMTS TDFNVGKTPD HYHQDPKPSG DRVDGREHRD HNPGHGDTSP FETKFVDATS
0301: AARAAAESAE RASFAARRAA ELSSKERMMM MQNSTESRNS SSYENLRSNP PHSRTSSSNM QGGGFGKEEL LKSNNRQVDQ STTTTRAESS KKTVDELSEN
0401: TSWRRGHSRE NSLEMRPNDS FAKIGREKQQ PGMDDINLSS SADVLNKKQS SRASSHSPSS NFSDDNDVTA LDHIDSPSIF EENKFQSTVG DRESYNDSPV
0501: VVVAPAFDDY SSFFDKPQFD TEDAYHDEPE QGLGFSLLGS SSKTSDHMPT EISSWSLEGH KDLGKLSSAS TSQVLEKEKP SSPPTFDDGP TSPPASLHEP
0601: EPSAKFDDYD RDSESEEDNL GRLSGRAEGK SKLTAQKSHM SEGPDDLGRY FFPSDTEDQG DDSKTQEESD AETPTGLKFG PLASGLENET TLPSYGSSPP
0701: RDKTSSKSIK EYLPTEVDPS RSSSLQTASS SSIRNELYTQ KASNSDKRPS SIPPDSSSSD DESDMELPKR VSFRYQEKRT ESRTRPTHLH SGVSHKDLEE
0801: EIPTRASTRS QDRRTHKTTP ASASASYFHT MSSDDEDEKE VHRDTAHIQT RPYISISRRT KGQERRPSLV TAKIDKVSFD EESPPKLSPE AKPLTKQQGS
0901: ASSLSYLPKT EKVSHDQESH PKLGLGAKPL IKQQGSASSL SFLPKTNKAS PDQDSPPKLV PKEKPAAKQR GSASSLSFLP KTDKASPDQD SPPKLLPKEK
1001: PAAKQQGSAT SSSSLPKTEK ISHYRESPSK LTPEAKSMAK QEGLASSSSS LPKTVTSPDP ETPAKEKASH VHPKLPDYDD IFAKLGALRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNM2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.