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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048482_P001 Maize cytosol, mitochondrion, nucleus, plastid 99.0 99.0
CDY04642 Canola cytosol 38.0 25.33
Zm00001d043813_P001 Maize mitochondrion 42.0 13.08
Zm00001d034058_P004 Maize mitochondrion 24.0 12.63
Zm00001d028457_P001 Maize mitochondrion 22.0 11.0
Zm00001d021453_P002 Maize plastid 57.0 10.9
Zm00001d034057_P001 Maize mitochondrion 24.0 10.48
Zm00001d049479_P003 Maize cytosol, mitochondrion, plastid 53.0 9.71
Zm00001d024425_P003 Maize cytosol 54.0 9.52
Zm00001d047887_P001 Maize mitochondrion 22.0 8.84
Zm00001d047886_P001 Maize mitochondrion 22.0 8.8
Zm00001d047885_P001 Maize mitochondrion 21.0 8.4
KRH60150 Soybean cytosol, mitochondrion, nucleus, plastid 48.0 8.26
Zm00001d011684_P002 Maize nucleus, plastid 99.0 8.18
Os01t0706400-01 Rice plasma membrane 89.0 8.08
EES03498 Sorghum nucleus, plastid 98.0 7.92
TraesCS3D01G253500.1 Wheat nucleus 87.0 7.79
TraesCS3B01G284600.1 Wheat nucleus 86.0 7.74
TraesCS3B01G288900.2 Wheat plastid 86.0 7.47
Zm00001d033714_P001 Maize mitochondrion 26.0 7.41
HORVU3Hr1G066420.1 Barley nucleus 87.0 7.35
TraesCS3A01G252800.1 Wheat cytosol 78.0 6.98
CDY35879 Canola mitochondrion 60.0 6.54
Bra039012.1-P Field mustard mitochondrion 60.0 6.54
CDX82713 Canola mitochondrion 60.0 6.53
Zm00001d052541_P001 Maize extracellular 9.0 6.25
Bra011109.1-P Field mustard mitochondrion 57.0 6.2
AT2G19710.1 Thale cress mitochondrion, nucleus 58.0 6.19
CDY43502 Canola mitochondrion 57.0 6.1
PGSC0003DMT400030456 Potato mitochondrion, nucleus, plastid 63.0 5.81
KRH49036 Soybean mitochondrion 61.0 5.79
Solyc07g032230.2.1 Tomato nucleus 62.0 5.78
KRH74171 Soybean mitochondrion 61.0 5.73
VIT_11s0016g02580.t01 Wine grape mitochondrion 64.0 5.43
AT4G29440.1 Thale cress mitochondrion 55.0 5.05
GSMUA_Achr1P14380_001 Banana nucleus 62.0 4.98
Zm00001d053852_P001 Maize nucleus 31.0 4.53
Zm00001d028456_P001 Maize mitochondrion 24.0 4.52
Zm00001d014521_P001 Maize mitochondrion 23.0 2.98
KRH41442 Soybean cytosol 13.0 2.91
Zm00001d036913_P001 Maize cytosol 6.0 0.98
Zm00001d047884_P001 Maize cytosol 0.0 0.0
Zm00001d051744_P001 Maize nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Zm00001d028142_P001EnsemblPlants:Zm00001d028142_T001EnsemblPlantsGene:Zm00001d028142Gene3D:1.20.1260.60GO:GO:0006810GO:GO:0008150
GO:GO:0015031InterPro:Ist1ncoils:CoilPANTHER:PTHR12161PANTHER:PTHR12161:SF13PFAM:PF03398
ProteinID:ONL94827.1UniParc:UPI00084490EEUniProt:A0A1D6JSD6MapMan:35.2::
Description
Regulator of Vps4 activity in the MVB pathway protein
Coordinates
chr1:-:23996320..23997820
Molecular Weight (calculated)
11770.7 Da
IEP (calculated)
10.751
GRAVY (calculated)
-0.460
Length
100 amino acids
Sequence
(BLAST)
1: MHKSKGKFSG VLHKGFKPDK CKTSLRMAVG RIKLLRNRKE VQVRQMRREV AQLLEANQDM TARIRVEHVI REEKFMQAYD LIEVYCELIV ARLSIIDSQK
Best Arabidopsis Sequence Match ( AT2G19710.1 )
(BLAST)
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.