CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41442	Soybean	cytosol	63.34	82.51
CDY04642	Canola	cytosol	14.63	56.67
Zm00001d028142_P001	Maize	cytosol	8.26	48.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	8.09	47.0
KRG90825	Soybean	mitochondrion	21.34	38.27
KRH35947	Soybean	mitochondrion	21.34	38.27
KRH69704	Soybean	mitochondrion	25.65	34.02
KRH07948	Soybean	mitochondrion	25.3	33.33
KRH08570	Soybean	nucleus	27.71	30.49
KRH35011	Soybean	mitochondrion	20.31	30.33
KRG89505	Soybean	mitochondrion	9.81	30.16
KRH70215	Soybean	nucleus	27.37	29.61
KRH49036	Soybean	mitochondrion	47.85	26.4
KRH06586	Soybean	cytosol	2.75	26.23
KRH74171	Soybean	mitochondrion	46.64	25.47
KRH26063	Soybean	cytosol	9.12	25.36
KRH45249	Soybean	mitochondrion	16.87	24.75
KRH75395	Soybean	mitochondrion	16.7	24.07
KRH55350	Soybean	extracellular	8.43	24.02
AT2G19710.1	Thale cress	mitochondrion, nucleus	32.87	20.38
KRH23458	Soybean	mitochondrion	13.94	20.3
Bra011109.1-P	Field mustard	mitochondrion	31.84	20.11
PGSC0003DMT400030456	Potato	mitochondrion, nucleus, plastid	37.01	19.82
CDX82713	Canola	mitochondrion	31.33	19.8
CDY43502	Canola	mitochondrion	31.84	19.79
KRH46919	Soybean	mitochondrion	13.94	19.76
CDY35879	Canola	mitochondrion	31.15	19.74
Bra039012.1-P	Field mustard	mitochondrion	31.15	19.74
Solyc07g032230.2.1	Tomato	nucleus	36.14	19.57
KRH01764	Soybean	mitochondrion	14.46	19.0
KRH22410	Soybean	mitochondrion, nucleus	20.65	18.02
KRH70127	Soybean	mitochondrion, nucleus	11.7	17.89
KRH26928	Soybean	nucleus	20.14	17.65
KRH47048	Soybean	mitochondrion	11.53	17.54
Os01t0706400-01	Rice	plasma membrane	33.05	17.44
AT4G29440.1	Thale cress	mitochondrion	32.53	17.34
KRH44367	Soybean	mitochondrion	9.47	17.08
GSMUA_Achr1P14380_001	Banana	nucleus	35.28	16.47
TraesCS3D01G253500.1	Wheat	nucleus	31.5	16.38
TraesCS3B01G284600.1	Wheat	nucleus	31.33	16.38
TraesCS3A01G252800.1	Wheat	cytosol	30.98	16.1
Zm00001d011684_P002	Maize	nucleus, plastid	33.22	15.94
TraesCS3B01G288900.2	Wheat	plastid	31.15	15.71
EES03498	Sorghum	nucleus, plastid	33.22	15.6
HORVU3Hr1G066420.1	Barley	nucleus	31.67	15.55
VIT_11s0016g02580.t01	Wine grape	mitochondrion	30.12	14.84
KRH39280	Soybean	mitochondrion, nucleus	14.46	11.43
KRH48400	Soybean	mitochondrion, nucleus	14.11	11.16
KRH41578	Soybean	nucleus	13.25	9.65
KRH60286	Soybean	nucleus	12.56	9.53

Protein Annotations

EMBL:ACUP02003351	EnsemblPlants:KRH60150	EnsemblPlantsGene:GLYMA_05G223200	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF13	PFAM:PF03398
ProteinID:KRH60150	ProteinID:KRH60150.1	SEG:seg	UniParc:UPI00029632D8	UniProt:K7KRT6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr5:+:40264877..40268360

Molecular Weight (calculated)

63822.6 Da

IEP (calculated)

8.614

GRAVY (calculated)

-0.649

Length

581 amino acids

Sequence
(BLAST)

001: MFNRRSSKSS ECKTALTLAV PRIKLLKNKR EANVKQLRRE LAQLLHSGHN HAARVRVEHV VKEEKTMAAY DLIKIYCDLI AARMPMIESQ RNCPIDLKEA
101: ISSVIFASPR CSDIPELVVV KKHIMAKYGR EFVSAAVELR PDCGVNRLLV EKLSTSAPDG PTKIRILTAI AEEHNVQWQP SLEENHVNAS QDFLAGPNTL
201: ENGKPPQVQL HAPPVGDEKG PPNLRAYASY QLKEMHNISY EKSASLNSSG TGSQEMNFGN LYSENTSSFQ MGRQNWNIEF KDATSAAHAA AESAERASMA
301: ARAAAELSSR GKLTRQCSSE WLSSSVGELP QKYAFHATEH LSAGYVNSTF RRSSFEIHNE QANVREQHNQ VGSTNEHRTN SNENVAKLYQ SASLTSHNAF
401: REDKPFGNVY GVADIYPNDD NPQANQKSST WDSNAHFYSD TSRSEDGLPK RNSVTLAGSA SGLSRRMLAP SKTGTCLILK DDSLSKASKT SGASSGHGSA
501: EHAASKPNSE PKSEEIIILS AMVQASSSLT TTMTPDKEEA SKSLNSNQDI PSKEKASHVH PKLPDYDTFA AQFLPRKKGL Q

Best Arabidopsis Sequence Match ( AT2G19710.1 )
(BLAST)

001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.