CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97837
KRH31032

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79910.1	KRG97837	AT2G39760.1	21798944
AT1G79910.1	KRH31032	AT2G39760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47048	Soybean	mitochondrion	88.82	74.87
KRG89505	Soybean	mitochondrion	38.51	65.61
KRH06586	Soybean	cytosol	8.39	44.26
CDX87282	Canola	cytosol	27.64	44.06
GSMUA_Achr5P23530_001	Banana	nucleus	23.91	43.02
KRH23458	Soybean	mitochondrion	52.17	42.11
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	22.05	41.04
Bra008502.1-P	Field mustard	nucleus	38.2	32.45
CDY41108	Canola	nucleus	37.89	32.28
CDY37561	Canola	nucleus	37.58	32.1
AT1G79910.1	Thale cress	nucleus	36.34	30.71
Solyc06g066690.2.1	Tomato	nucleus	27.02	28.16
PGSC0003DMT400042551	Potato	nucleus	26.71	27.83
Solyc03g120120.2.1	Tomato	nucleus	35.71	24.16
PGSC0003DMT400014529	Potato	nucleus	31.37	22.44
Solyc12g043150.1.1	Tomato	nucleus	34.78	21.96
VIT_09s0002g04580.t01	Wine grape	nucleus	34.16	21.96
KRH26063	Soybean	cytosol	13.66	21.05
KRH55350	Soybean	extracellular	12.73	20.1
GSMUA_Achr6P29590_001	Banana	cytosol	27.64	19.43
PGSC0003DMT400092826	Potato	nucleus	23.29	17.65
KRH35947	Soybean	mitochondrion	17.7	17.59
KRG90825	Soybean	mitochondrion	17.7	17.59
KRH69704	Soybean	mitochondrion	21.43	15.75
KRH35011	Soybean	mitochondrion	18.63	15.42
KRH45249	Soybean	mitochondrion	18.94	15.4
KRH46919	Soybean	mitochondrion	19.57	15.37
KRH07948	Soybean	mitochondrion	20.81	15.19
KRH75395	Soybean	mitochondrion	18.94	15.14
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	32.92	14.95
KRH48400	Soybean	mitochondrion, nucleus	33.85	14.83
KRH39280	Soybean	mitochondrion, nucleus	33.54	14.69
KRH01764	Soybean	mitochondrion	19.88	14.48
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	32.61	14.44
Os06t0687000-00	Rice	mitochondrion	32.61	14.4
EES04550	Sorghum	nucleus	30.43	14.35
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	32.3	14.33
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	32.3	14.33
Zm00001d053852_P001	Maize	nucleus	30.43	14.31
KRH60286	Soybean	nucleus	33.85	14.23
Os02t0159200-01	Rice	nucleus	29.5	14.07
KRH70127	Soybean	mitochondrion, nucleus	16.15	13.68
HORVU6Hr1G025460.3	Barley	nucleus	29.81	13.04
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	28.88	13.04
KRH41578	Soybean	nucleus	32.3	13.03
GSMUA_Achr8P15690_001	Banana	mitochondrion	27.02	12.99
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	28.57	12.87
KRH08570	Soybean	nucleus	20.5	12.5
KXG20673	Sorghum	cytosol, nucleus, plastid	30.43	12.48
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	26.09	12.48
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	27.64	12.45
KRH70215	Soybean	nucleus	20.5	12.29
Zm00001d014521_P001	Maize	mitochondrion	28.26	11.8
KRH22410	Soybean	mitochondrion, nucleus	20.81	10.06
KRH26928	Soybean	nucleus	20.5	9.95
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	17.08	9.47
KRH41442	Soybean	cytosol	10.56	7.62
Zm00001d036913_P001	Maize	cytosol	12.73	6.71
KRH74171	Soybean	mitochondrion	21.43	6.48
KRH49036	Soybean	mitochondrion	20.5	6.27
Zm00001d051744_P001	Maize	nucleus	6.52	4.18

Protein Annotations

EMBL:ACUP02004927	EnsemblPlants:KRH44367	EnsemblPlantsGene:GLYMA_08G206300	EntrezGene:100792068	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF14	PFAM:PF03398
ProteinID:KRH44367	ProteinID:KRH44367.1	SEG:seg	UniParc:UPI0002337E44	UniProt:I1KV82	MapMan:35.2

Description

hypothetical protein

Coordinates

chr8:+:16681770..16684657

Molecular Weight (calculated)

37252.0 Da

IEP (calculated)

7.461

GRAVY (calculated)

-0.867

Length

322 amino acids

Sequence
(BLAST)

001: MFRWLLKPRF YSKCLSYVKF MKTRLEIIQK KKKAEQKFMK SDIAELLRSG LDYDAYIRAK GLLLEQNMLS CYELIEKFVG CLSDHVEDLT KQKDCPDECK
101: EAVSSLMYAA ARFADLPELR DLRTLFTETF GNSLEPYINK EFVEKLRQDP PTREMKIGLL YDIAQEFSVE WDDNALRQRL YTESSLCEER PNPRRDLITS
201: KGKERDTDTL PLGRKDFNDV SLIHQNSSDD ETSTELSSHD GRKGSSSNSL GSFSEDEVET KRPISSYLLI PPPYLKQKTN TGESNSKRTT HSEAAGKGKR
301: YPSQQQEHDT GDNRRLRTSH VR

Best Arabidopsis Sequence Match ( AT1G79910.1 )
(BLAST)

001: MFDGLFKPKF YTKCKSLVKI TKTRVDTVKR KKNSVCKYLK NDIVDLLKNS LDYNAYGRAE GLIEEKRRLA CYEFLEQFCN CVASNVSLLQ KSIRCPDECR
101: EAISSLVYAA ARVSEVPELR DLRSLFAERY GNTLDQFVNP EFVERFKAEP PSKEMKVELL QEIAREYSIK WDAKSLEQRL YTPPHHHHVH TETEEPKTEK
201: TNSEPEKTME KRSSLSFHGR EDSMDDSNKS IMSTSEEDSM STSGSCMTGP EDDPEMKPFY YRFMTPAPYT KPKIEKQESL PEKMTTSHLM DTESPTGGKP
301: KPRSVRRRFA NPPPEAETEG EALKLKVESK NMMRASESMG KASGEGFRRM SRRTASWQHK PSSCVPDFDE VAARVDALSR Y

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8L402]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.