CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48400	Soybean	mitochondrion, nucleus	92.93	92.93
KRH06586	Soybean	cytosol	6.8	81.97
KRH60286	Soybean	nucleus	56.6	54.31
KRH41578	Soybean	nucleus	56.46	52.01
GSMUA_Achr5P23530_001	Banana	nucleus	11.56	47.49
KRG89505	Soybean	mitochondrion	11.7	45.5
VIT_11s0016g04010.t01	Wine grape	nucleus	41.36	41.87
CDX68838	Canola	nucleus	32.24	37.62
CDX75238	Canola	nucleus	31.7	36.93
KRH23458	Soybean	mitochondrion	19.59	36.09
KRH44367	Soybean	mitochondrion	14.69	33.54
AT4G32350.1	Thale cress	nucleus	33.33	33.47
KRH47048	Soybean	mitochondrion	17.14	32.98
PGSC0003DMT400022180	Potato	nucleus	24.63	32.79
Solyc07g022860.2.1	Tomato	nucleus	24.08	32.12
GSMUA_Achr6P29590_001	Banana	cytosol	18.64	29.91
EES04550	Sorghum	nucleus	23.95	25.77
Os02t0159200-01	Rice	nucleus	23.13	25.19
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	24.08	24.76
Zm00001d053852_P001	Maize	nucleus	22.86	24.53
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	23.81	24.48
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	23.54	24.4
Os06t0687000-00	Rice	mitochondrion	23.95	24.14
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	23.4	24.12
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	23.54	23.83
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	23.27	23.52
HORVU6Hr1G025460.3	Barley	nucleus	23.54	23.51
KRH26063	Soybean	cytosol	6.67	23.45
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	22.59	22.86
GSMUA_Achr8P15690_001	Banana	mitochondrion	20.14	22.09
KRH55350	Soybean	extracellular	5.99	21.57
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	19.59	21.4
KXG20673	Sorghum	cytosol, nucleus, plastid	22.59	21.15
KRH07948	Soybean	mitochondrion	12.52	20.86
KRH69704	Soybean	mitochondrion	12.24	20.55
KRG90825	Soybean	mitochondrion	8.98	20.37
Zm00001d014521_P001	Maize	mitochondrion	21.09	20.1
KRH35947	Soybean	mitochondrion	8.71	19.75
KRH35011	Soybean	mitochondrion	10.07	19.02
KRH70127	Soybean	mitochondrion, nucleus	9.8	18.95
KRH45249	Soybean	mitochondrion	10.2	18.94
KRH75395	Soybean	mitochondrion	10.07	18.36
KRH01764	Soybean	mitochondrion	10.34	17.19
KRH46919	Soybean	mitochondrion	9.52	17.07
KRH08570	Soybean	nucleus	12.11	16.86
KRH70215	Soybean	nucleus	12.11	16.57
KRH22410	Soybean	mitochondrion, nucleus	14.42	15.92
KRH26928	Soybean	nucleus	14.29	15.84
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	11.43	14.46
KRH41442	Soybean	cytosol	7.48	12.33
KRH74171	Soybean	mitochondrion	14.42	9.96
KRH49036	Soybean	mitochondrion	14.01	9.78
Zm00001d036913_P001	Maize	cytosol	7.76	9.33
Zm00001d051744_P001	Maize	nucleus	4.9	7.17

Protein Annotations

EMBL:ACUP02005929	EnsemblPlants:KRH39280	EnsemblPlantsGene:GLYMA_09G190400	EntrezGene:100820462	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF29
PFAM:PF03398	ProteinID:KRH39280	ProteinID:KRH39280.1	SEG:seg	UniParc:UPI000294FC67	UniProt:K7LES3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:41482454..41489233

Molecular Weight (calculated)

83463.5 Da

IEP (calculated)

9.461

GRAVY (calculated)

-1.050

Length

735 amino acids

Sequence
(BLAST)

001: MLDGLLGRGF AAKCKSLMKL TKNRIDLIRR KRKATEKFLK KDIADLLANG LDDRAYGRAE GLFVELTLSS CYDFVDQSCD FVLKHLPVLQ KLSGCPEEVR
101: EAISSLMFAA ARFSDLPELR DLRQIFQDRY GSSLECYVNQ EFATNLNSKS STLEKKVHLM QDIASEFAIK WDSKAFELRM SKCSVFAQDR NNFKSNHTSD
201: HDIPLQGKDA TPKGVKFERS HDHPNDRHKF QNGKEAVVSK GDENHLCSKS NPPIPENGFK PLSSYDEVNL KRDSHGNPLP GREELSKVSD RGYWKEGSML
301: KPIGSSSKDT REEQFEGGSN LHDSWGNARR VKESQDTATA RKSPGPAGSR SKNNVNESYV VNHGGLPDVD YLERKNPKDE TFRVKPFYNN ANPPAYTREE
401: QFEGGFNQHD SWGNARRVKE SQDTATSRKS PGHAGSHSKN NVNKPFAVNH GGLPDVDNSE RRTQKDETPR AKPFYNNAMI PPPYVKPHSK LKNNKHENNS
501: VYSNIDSDGI RTYPLVHEKP DAAPTMDRIQ PGLDDSERDL QATRHARLSK HGHEKALSVQ EDATEAVVLK QKSTRRKHSK SRSTQDDASN EDAEVVRKPR
601: SRRRDEQKRG LQILFDDERH KNDEEERVID RLLIHYSKKP SINVPEKTRR KYRSCLVHQM DNSTRDGPDE TPEMVTRPPR SVSLPREQTE AVEVKKVYAR
701: AASFQPERLN EARHVHPKLP DCDDLAARIA ALRGT

Best Arabidopsis Sequence Match ( AT4G32350.3 )
(BLAST)

001: MFDGFLGRGF APKGKPLIKL TKNRIDVLRR KRNATIKFLK RDLADLIING HDYNAFSRAG GLLDELRYLW SLDFVEQTCD FVYKQLSTMQ KTPECPEDCR
101: EAISSLMFAA SGFSELPELR ELRQMFHEKY TDSLALFVNQ ELVENMSSKP FSMEKKVKLM EDVALEFSIR WDSKDFEKRI VRQNSISVME TPKSTNDKYK
201: PVDRNMALPK REEFEGSENG VSLNRKTAEA SERRDPLFQS DKESYQNGLR GNQRGLTYKE RSENVLHASR SESKDNKAER KEFYLHSKQN PAREKHQPIF
301: NEGDTIVMKV NYGNLGQGNG HRPGVVDAHK KTEFVASERK EFYSQSKQEP SRERHQPIFN DGDTIVMKVK HENHVQGNGH KNGVVDLHKK IEVNASEKLK
401: SSSSKRADKL VIGFKQESFF QGYKHEKNEE HAHQKVEDST SRPPKPNSKS KRAESINPGS RHHNDRESKE NAVLVGKSTE EDPSGDNVKG GEYEYDHANP
501: ARKVEERETE RMKSPFYKSL PPPYVKKSIA KARHEKAEAL DNPKARFDGE EGNHPDNGKN VYGAERRNGA GHHEVNDIDN ASLKRQTNRR KHIVESGGDD
601: HISSRRRENS RKGLQVLIDE DEKDSEEKMM DKLLMHYSKK PSSYEKDNVQ EESKSRRTHL KKGESDEEMM IHQPARSRSL PAEQLAGPSE PAKTFARAAS
701: FQPERSSEAK HVHPKLPNYD DLAARFAELK GR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8RXT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.