Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26063 | Soybean | cytosol | 84.8 | 82.78 |
| Bra021112.1-P | Field mustard | nucleus | 28.43 | 24.27 |
| CDY20110 | Canola | nucleus | 28.43 | 24.27 |
| CDY21843 | Canola | nucleus | 28.43 | 23.67 |
| AT3G15490.1 | Thale cress | mitochondrion, nucleus | 22.55 | 21.8 |
| KRG89505 | Soybean | mitochondrion | 20.1 | 21.69 |
| Bra027239.1-P | Field mustard | plastid | 25.98 | 20.95 |
| CDX97673 | Canola | plastid | 25.49 | 20.16 |
| CDX98558 | Canola | plastid | 25.49 | 20.16 |
| Bra013184.1-P | Field mustard | mitochondrion | 23.04 | 19.42 |
| CDX93076 | Canola | mitochondrion | 23.04 | 19.42 |
| CDY15051 | Canola | cytosol | 15.69 | 18.08 |
| KRH06586 | Soybean | cytosol | 4.9 | 16.39 |
| KRG90825 | Soybean | mitochondrion | 22.55 | 14.2 |
| KRH35947 | Soybean | mitochondrion | 22.55 | 14.2 |
| KRH44367 | Soybean | mitochondrion | 20.1 | 12.73 |
| KRH70127 | Soybean | mitochondrion, nucleus | 23.53 | 12.63 |
| KRH45249 | Soybean | mitochondrion | 24.51 | 12.63 |
| KRH35011 | Soybean | mitochondrion | 23.53 | 12.34 |
| KRH07948 | Soybean | mitochondrion | 25.98 | 12.02 |
| KRH69704 | Soybean | mitochondrion | 25.49 | 11.87 |
| KRH47048 | Soybean | mitochondrion | 21.57 | 11.52 |
| KRH75395 | Soybean | mitochondrion | 22.55 | 11.41 |
| KRH26928 | Soybean | nucleus | 34.31 | 10.56 |
| KRH22410 | Soybean | mitochondrion, nucleus | 33.82 | 10.36 |
| KRH23458 | Soybean | mitochondrion | 20.1 | 10.28 |
| KRH46919 | Soybean | mitochondrion | 20.59 | 10.24 |
| KRH01764 | Soybean | mitochondrion | 22.06 | 10.18 |
| KRH08570 | Soybean | nucleus | 23.04 | 8.9 |
| KRH70215 | Soybean | nucleus | 23.04 | 8.75 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 24.02 | 8.43 |
| KRH41442 | Soybean | cytosol | 14.71 | 6.73 |
| KRH39280 | Soybean | mitochondrion, nucleus | 21.57 | 5.99 |
| KRH48400 | Soybean | mitochondrion, nucleus | 21.57 | 5.99 |
| KRH60286 | Soybean | nucleus | 19.61 | 5.22 |
| KRH41578 | Soybean | nucleus | 20.1 | 5.14 |
| KRH74171 | Soybean | mitochondrion | 22.06 | 4.23 |
| KRH49036 | Soybean | mitochondrion | 21.57 | 4.18 |
Protein Annotations
| EMBL:ACUP02003968 | EnsemblPlants:KRH55350 | EnsemblPlantsGene:GLYMA_06G248400 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF20 | PFAM:PF03398 | ProteinID:KRH55350 |
| ProteinID:KRH55350.1 | UniParc:UPI0006EDDAE5 | UniProt:A0A0R0JLB9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:41908556..41910012
Molecular Weight (calculated)
23613.8 Da
IEP (calculated)
6.262
GRAVY (calculated)
0.028
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIEKKKPSR PMWSYAIRYA LLVSITLQLC SENLIMQFQA QLIIQKNRRH VIINQSREDI VQLLQIDKLE GAFSRVDQLY KDTCLLTAYD LIDNFCECII
101: SNMSFISKCS SVHNLSTNVV VAIASLTYAS SRCGELPLLH LIRNLFRERY GRDFDITNVE LFAGNYVDLP LRKNLSIYSV PEDEKLMLLN DIALENFNKE
201: LEIL
101: SNMSFISKCS SVHNLSTNVV VAIASLTYAS SRCGELPLLH LIRNLFRERY GRDFDITNVE LFAGNYVDLP LRKNLSIYSV PEDEKLMLLN DIALENFNKE
201: LEIL
001: MVRQSRSDIA QLLSYGRYSE ALPKAKQFYE DERRLSAYDQ VELFCTTILQ NISSLKYENN VDLLPEETKK AMAGIIFAAS RIGELEDLQH IRSFFVQRFG
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q4PSP2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.