CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08570	Soybean	nucleus	53.47	39.39
KRH70215	Soybean	nucleus	53.21	38.55
VIT_18s0164g00040.t01	Wine grape	nucleus	51.93	37.48
GSMUA_Achr5P23420_001	Banana	mitochondrion	43.96	34.9
KRG90825	Soybean	mitochondrion	28.28	33.95
PGSC0003DMT400070850	Potato	cytosol	46.02	33.9
Solyc04g072560.2.1	Tomato	nucleus, unclear	46.02	33.9
KRH35947	Soybean	mitochondrion	28.02	33.64
KXG24567	Sorghum	cytosol, plastid	44.47	33.53
TraesCS3B01G498800.1	Wheat	cytosol	43.7	33.27
HORVU3Hr1G098720.3	Barley	cytosol	43.7	33.14
CDY46461	Canola	cytosol, mitochondrion, nucleus	48.07	33.04
Bra036745.1-P	Field mustard	nucleus	48.07	33.04
TraesCS3D01G451700.1	Wheat	cytosol	43.44	33.01
TraesCS3A01G459100.1	Wheat	cytosol, plastid	43.19	32.68
CDX91784	Canola	nucleus	48.07	32.24
KRG89505	Soybean	mitochondrion	15.42	31.75
Zm00001d049479_P003	Maize	cytosol, mitochondrion, plastid	43.7	31.14
Os08t0175200-01	Rice	nucleus	43.96	30.48
GSMUA_Achr6P02830_001	Banana	cytosol	46.02	30.44
Zm00001d024425_P003	Maize	cytosol	44.22	30.34
KRH07948	Soybean	mitochondrion	34.19	30.16
KRH69704	Soybean	mitochondrion	33.93	30.14
CDY48635	Canola	cytosol	25.45	29.55
KRH06586	Soybean	cytosol	4.63	29.51
AT1G34220.1	Thale cress	nucleus	47.81	28.66
KRH26063	Soybean	cytosol	13.62	25.36
KRH55350	Soybean	extracellular	12.34	23.53
KRH45249	Soybean	mitochondrion	20.82	20.45
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	30.33	20.31
KRH75395	Soybean	mitochondrion	20.57	19.85
KRH44367	Soybean	mitochondrion	15.42	18.63
KRH23458	Soybean	mitochondrion	17.99	17.54
KRH41442	Soybean	cytosol	20.05	17.49
KRH47048	Soybean	mitochondrion	16.97	17.28
KRH46919	Soybean	mitochondrion	17.22	16.34
KRH01764	Soybean	mitochondrion	17.99	15.84
KRH70127	Soybean	mitochondrion, nucleus	15.17	15.53
KRH22410	Soybean	mitochondrion, nucleus	21.85	12.76
KRH26928	Soybean	nucleus	21.08	12.37
KRH49036	Soybean	mitochondrion	32.39	11.97
KRH74171	Soybean	mitochondrion	32.39	11.84
KRH39280	Soybean	mitochondrion, nucleus	19.02	10.07
KRH48400	Soybean	mitochondrion, nucleus	18.51	9.8
KRH60286	Soybean	nucleus	16.71	8.49
KRH41578	Soybean	nucleus	15.17	7.39

Protein Annotations

EMBL:ACUP02006648	EnsemblPlants:KRH35011	EnsemblPlantsGene:GLYMA_10G218700	EntrezGene:100816410	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF5
PFAM:PF03398	ProteinID:KRH35011	ProteinID:KRH35011.1	SEG:seg	UniParc:UPI00023CD774	UniProt:I1LD97
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:45056903..45059806

Molecular Weight (calculated)

43806.7 Da

IEP (calculated)

6.745

GRAVY (calculated)

-0.536

Length

389 amino acids

Sequence
(BLAST)

001: MPMLRCFFNK AFKASKCATL LQLTIPRIKL LRNRREVHLK QMRRDVAKLL EAGQEAKASL KVEHVMREEN IMAAQDIIQL FCELIAARIA FVQSQRKCPL
101: DLKEAISSVC FAAPRCADLP ELLQVQSLFA SKYGKDFVSA ATDLTPDCSV NGQLIELLSV QAPSQEKKLK LLKEIAVEHK LDWDPTASET KSFKKHEDLL
201: NDPIQFCSQC VSKLPLPEEK HTEVDLQSSS QSGSLGSDKH KPNTSFDKKD SEQSMSFIST PLDNKLTKKN GAHVSDSSFE NPFFVSVGNK SETEREHFTE
301: QNAANDYDDG GINNVEFEPA FSFSHSSSFP SFDIPKEDFG SSLHNHSVLD DKSSHHQLKR LPSLDDYSGF SYPNLFTPKN SNNWSHTFR

Best Arabidopsis Sequence Match ( AT1G34220.2 )
(BLAST)

001: MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4HUX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.