CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35947	Soybean	mitochondrion	95.37	95.37
Zm00001d052541_P001	Maize	extracellular	30.86	69.44
VIT_01s0011g03610.t01	Wine grape	mitochondrion	68.21	67.17
Bra012478.1-P	Field mustard	mitochondrion	63.58	63.78
CDY58595	Canola	mitochondrion	63.58	63.78
CDY53122	Canola	mitochondrion	63.27	63.47
AT1G25420.1	Thale cress	mitochondrion	62.96	63.16
Solyc04g007230.2.1	Tomato	mitochondrion	62.35	62.54
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	58.64	59.56
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	58.64	59.56
Zm00001d043813_P001	Maize	mitochondrion	58.33	58.88
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	57.72	58.62
KXG33152	Sorghum	mitochondrion	58.02	58.57
Os01t0687700-01	Rice	mitochondrion, plasma membrane	57.1	57.99
GSMUA_Achr3P29510_001	Banana	mitochondrion	58.02	57.67
GSMUA_Achr9P21370_001	Banana	mitochondrion	57.72	57.19
KXG19452	Sorghum	mitochondrion	46.3	54.55
HORVU3Hr1G063860.1	Barley	plastid	58.02	51.79
KRG89505	Soybean	mitochondrion	17.59	30.16
KRH07948	Soybean	mitochondrion	39.2	28.8
KRH69704	Soybean	mitochondrion	38.89	28.77
KRH08570	Soybean	nucleus	46.6	28.6
KRH70215	Soybean	nucleus	46.91	28.31
KRH35011	Soybean	mitochondrion	33.95	28.28
KRH06586	Soybean	cytosol	4.63	24.59
KRH45249	Soybean	mitochondrion	29.01	23.74
KRH75395	Soybean	mitochondrion	29.01	23.33
KRH55350	Soybean	extracellular	14.2	22.55
KRH26063	Soybean	cytosol	14.51	22.49
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	38.27	21.34
KRH44367	Soybean	mitochondrion	17.59	17.7
KRH01764	Soybean	mitochondrion	22.84	16.74
KRH23458	Soybean	mitochondrion	20.37	16.54
KRH46919	Soybean	mitochondrion	20.68	16.34
KRH47048	Soybean	mitochondrion	18.52	15.71
KRH41442	Soybean	cytosol	21.6	15.7
KRH70127	Soybean	mitochondrion, nucleus	14.81	12.63
KRH49036	Soybean	mitochondrion	40.12	12.35
KRH74171	Soybean	mitochondrion	40.12	12.22
KRH22410	Soybean	mitochondrion, nucleus	21.6	10.51
KRH26928	Soybean	nucleus	20.99	10.26
KRH39280	Soybean	mitochondrion, nucleus	20.37	8.98
KRH48400	Soybean	mitochondrion, nucleus	20.06	8.84
KRH60286	Soybean	nucleus	19.75	8.36
KRH41578	Soybean	nucleus	19.44	7.89

Protein Annotations

EMBL:ACUP02012646	EnsemblPlants:KRG90825	EnsemblPlantsGene:GLYMA_20G116300	EntrezGene:100820205	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398
ProteinID:KRG90825	ProteinID:KRG90825.1	SEG:seg	UniParc:UPI000233DBE5	UniProt:I1NFJ5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr20:-:35849641..35854467

Molecular Weight (calculated)

35834.6 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.420

Length

324 amino acids

Sequence
(BLAST)

001: MSLLNQLFNR GVFGTRCKTC LNLAISRIKL LQNKRDMQLK QMCKEISQFL QAGQEAIARI RVEHIIREQN TWAAYEILEL FCEFVLARVP IIENQRECPT
101: ELREAIASII FAAPRCSDVP DLLHIKNLFT TKYGKEFVSA VSELRPDSGV NRTIIEKLSV SAPSGEVKLK VLREIAEEYN IAWDSSKTEA EFRKNHEDLL
201: GGAKQVSAGA TLSHTPSRNG SNNPSPCITE PSIKPVQDKQ EYKHLEAPSP SNNNSSLDTN EIEQSHKNNN VPAGDAKSET RFQSSDVLEK ARAAIASADR
301: ASAAARAAAA LVQSNFGSLK LEGK

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.