Factsheet for HORVU3Hr1G063860.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	84.02	95.61
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	82.64	94.04
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	82.64	94.04
Os01t0687700-01	Rice	mitochondrion, plasma membrane	71.9	81.82
Zm00001d043813_P001	Maize	mitochondrion	70.8	80.06
KXG33152	Sorghum	mitochondrion	70.8	80.06
Zm00001d052541_P001	Maize	extracellular	31.68	79.86
KXG19452	Sorghum	mitochondrion	52.62	69.45
GSMUA_Achr9P21370_001	Banana	mitochondrion	55.65	61.77
GSMUA_Achr3P29510_001	Banana	mitochondrion	55.1	61.35
KRG90825	Soybean	mitochondrion	51.79	58.02
KRH35947	Soybean	mitochondrion	51.24	57.41
Solyc04g007230.2.1	Tomato	mitochondrion	50.14	56.35
VIT_01s0011g03610.t01	Wine grape	mitochondrion	49.31	54.41
Bra012478.1-P	Field mustard	mitochondrion	46.01	51.7
CDY58595	Canola	mitochondrion	46.01	51.7
AT1G25420.1	Thale cress	mitochondrion	45.18	50.77
CDY53122	Canola	mitochondrion	44.9	50.46
HORVU4Hr1G062250.1	Barley	mitochondrion	18.18	35.87
HORVU3Hr1G098720.3	Barley	cytosol	40.5	28.66
HORVU4Hr1G062260.2	Barley	plastid	18.73	23.86
HORVU5Hr1G086370.1	Barley	nucleus, plastid	35.54	23.63
HORVU4Hr1G062110.1	Barley	mitochondrion	20.39	13.5
HORVU3Hr1G066420.1	Barley	nucleus	32.23	9.89
HORVU6Hr1G025460.3	Barley	nucleus	17.08	8.42
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	16.53	8.26

Protein Annotations

EnsemblPlants:HORVU3Hr1G063860.1	EnsemblPlantsGene:HORVU3Hr1G063860	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	SEG:seg	UniParc:UPI000B47D480
UniProt:A0A287LCB7	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:487521134..487528965

Molecular Weight (calculated)

39872.6 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.361

Length

363 amino acids

Sequence
(BLAST)

001: LQIHTEQLLS PPSSSSPGQV DQRPPLTMSS LNSLFNRSSP FGTKCKTCLN LIISRIKLLR NRREMQLINM RKEMVQYLQT GQESIARIRV EHIIREQNIL
101: AAYEIVELFC EFVLARVPIV EAQKECPLEL REAIASIIFA SGRCSDLPEL MHLRNLFTTK YGKEFVAAAM ELRPDCGVNR TIIEKLSVKA PSAESKLKVL
201: KAIAHEYNLD WDSSNTEAEF NKKYEDLLDD SGSSVRQGQT PKIESSPGSS ISRDKPSILP VNDTSKNKTP ESPKSPAVSS RAYAATKSNV AVQEHHPPAA
301: ERSSSAGPGS SDVLEKARAA IVAATRASAA AWTAAELVNK LKYACIGSLD ANHGSKHLDS RCS

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.