Factsheet for HORVU4Hr1G062110.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	86.5	87.78
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	85.4	87.48
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	86.5	87.45
EER92527	Sorghum	mitochondrion, plastid	61.13	62.5
Os03t0257600-01	Rice	mitochondrion	61.13	62.04
Zm00001d028456_P001	Maize	mitochondrion	59.49	61.39
HORVU4Hr1G062250.1	Barley	mitochondrion	20.44	60.87
HORVU4Hr1G062260.2	Barley	plastid	24.09	46.32
VIT_14s0006g03050.t01	Wine grape	mitochondrion	12.23	42.95
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	25.36	32.63
Solyc02g085830.2.1	Tomato	mitochondrion	11.86	31.25
PGSC0003DMT400033769	Potato	mitochondrion	24.27	31.15
Solyc05g009550.2.1	Tomato	mitochondrion	23.91	30.68
PGSC0003DMT400032944	Potato	mitochondrion	11.5	30.29
GSMUA_Achr6P24100_001	Banana	mitochondrion	26.46	29.65
KRH45249	Soybean	mitochondrion	21.35	29.55
KRH75395	Soybean	mitochondrion	20.8	28.29
VIT_01s0011g03330.t01	Wine grape	mitochondrion	24.09	28.21
CDY50176	Canola	mitochondrion	20.07	27.92
GSMUA_Achr10P...	Banana	mitochondrion	24.64	27.89
CDY21093	Canola	mitochondrion	19.71	27.34
CDY19375	Canola	mitochondrion	19.34	25.98
AT1G13340.1	Thale cress	mitochondrion	18.8	25.18
KRH46919	Soybean	mitochondrion	18.61	24.88
KRH01764	Soybean	mitochondrion	19.71	24.43
Bra019826.1-P	Field mustard	mitochondrion	20.07	22.27
HORVU3Hr1G063860.1	Barley	plastid	13.5	20.39
HORVU3Hr1G098720.3	Barley	cytosol	17.15	18.32
HORVU5Hr1G086370.1	Barley	nucleus, plastid	17.7	17.77
Bra016733.1-P	Field mustard	mitochondrion	19.71	14.46
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	13.5	10.19
HORVU6Hr1G025460.3	Barley	nucleus	13.14	9.78
HORVU3Hr1G066420.1	Barley	nucleus	16.42	7.61

Protein Annotations

EnsemblPlants:HORVU4Hr1G062110.1	EnsemblPlantsGene:HORVU4Hr1G062110	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF17	PFAM:PF03398	SEG:seg	UniParc:UPI000295E827
UniProt:M0XEV4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:521415470..521418120

Molecular Weight (calculated)

59154.5 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.722

Length

548 amino acids

Sequence
(BLAST)

001: MGFFTRSTSK QTAKLKSLLK IAVARLAVAR RPRLGRRSIA RGDVAQLLSI GHLDRALVRA EQVIEEDGML EALDIIEHYC KILVEQSAQL EKPKECGEEI
101: KAAAAGLIFA SARCGELPEL LDARPILASK FGREFERAAK EGSQVVVNPT LVQRLSGQKA SAEQQRRLAR EIAAENDILL DFPGSPGAAH QSKQSEQVKN
201: VPVPVPAGKS VERFEVKTET SDDNMRRQRL ADDNMRRPSL AQLRAEEKAS RESKKYDDVR MAAEAAFESA SFAAMAARAA VELSRTESQG KGPRGGGRGH
301: DRVQPLQGSG AAERETQPPG RPQKPPSPSP SPSWSDKSTL SSVWSDAPAR DAPSPPKGKS IVFDQSDGED NDVVEDLDWT PQLRRPPYGR AASAMGMDGV
401: GGNGSTHGAQ REVGAASPRP LQDGSQDARP THRRYASEHA GGGARREAPE QVGQYRAPPY RRSPAADAGG YGGAYESSAF VARAPYARIT SALEGGNEHI
501: ARHEEVRRMG TDARVLQEKV YGPAGDAPGP GRAPLTPDRR AISVRTRR

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.