Factsheet for Os03t0257600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028456_P001	Maize	mitochondrion	64.26	65.35
EER92527	Sorghum	mitochondrion, plastid	64.81	65.3
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	62.04	62.62
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	62.78	62.55
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	62.04	62.04
HORVU4Hr1G062110.1	Barley	mitochondrion	62.04	61.13
Os03t0257500-01	Rice	mitochondrion	20.56	57.51
VIT_14s0006g03050.t01	Wine grape	mitochondrion	13.15	45.51
Os03t0710000-01	Rice	plasma membrane	23.7	36.06
PGSC0003DMT400032944	Potato	mitochondrion	12.22	31.73
Solyc02g085830.2.1	Tomato	mitochondrion	12.22	31.73
Solyc05g009550.2.1	Tomato	mitochondrion	25.0	31.62
PGSC0003DMT400033769	Potato	mitochondrion	24.63	31.15
KRH45249	Soybean	mitochondrion	22.04	30.05
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	23.52	29.81
CDY50176	Canola	mitochondrion	21.11	28.93
KRH75395	Soybean	mitochondrion	21.48	28.78
GSMUA_Achr6P24100_001	Banana	mitochondrion	25.56	28.22
VIT_01s0011g03330.t01	Wine grape	mitochondrion	23.7	27.35
GSMUA_Achr10P...	Banana	mitochondrion	24.44	27.27
CDY21093	Canola	mitochondrion	19.81	27.09
CDY19375	Canola	mitochondrion	20.0	26.47
AT1G13340.1	Thale cress	mitochondrion	20.0	26.41
KRH46919	Soybean	mitochondrion	18.89	24.88
KRH01764	Soybean	mitochondrion	19.63	23.98
Os01t0687700-01	Rice	mitochondrion, plasma membrane	13.7	23.2
Bra019826.1-P	Field mustard	mitochondrion	21.11	23.08
Os09t0547200-01	Rice	mitochondrion	15.74	17.86
Os08t0175200-01	Rice	nucleus	16.3	15.69
Bra016733.1-P	Field mustard	mitochondrion	19.81	14.32
Os02t0159200-01	Rice	nucleus	13.33	10.67
Os06t0687000-00	Rice	mitochondrion	12.96	9.6
Os01t0706400-01	Rice	plasma membrane	15.74	7.72

Protein Annotations

EnsemblPlants:Os03t0257600-01	EnsemblPlantsGene:Os03g0257600	EntrezGene:4332301	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF17	PFAM:PF03398	ProteinID:ABF95057.1
ProteinID:BAS83333.1	RefSeq:XP_015628614.1	SEG:seg	UniParc:UPI0000DB4583	UniProt:Q10NU9	MapMan:35.2

Description

Hypothetical conserved gene. (Os03t0257600-01)

Coordinates

chr3:-:8329118..8331769

Molecular Weight (calculated)

58674.8 Da

IEP (calculated)

9.353

GRAVY (calculated)

-0.712

Length

540 amino acids

Sequence
(BLAST)

001: MGLFGGKSAS SKQTAKLKSL IKLAAARVAV ARRPRLGRRS IARGDVAQLL SIGHLDRALL RAEQVIDEDN MLEVLDIVEL YCKILIEQAT QLDKPKECGE
101: EIKEAAAGLM FASARCGDLP ELLDARAILA DKFGRDFAAA AKDGAHGVVD PTLVRKLSGA PASTEQKQRL TKVIAAENDI LLEFPENTGD TDQGKQNEQA
201: RNVRAEQFVE QNEVKREHHE VQGRQRFVDE EVNPILARLS VQEQYADARM AAEAAFKSAS FAAMAARAAV ELSRSESQGK GSRGGGGGGY EKVHPVQNSV
301: AGEKEAPPSW KPHKPPSPST SPSWSDRSTA TSVWSEGTQK GKGVVFDGSD EEVDDVAWTP QLRRPPYRRA STMGIGGGAW NGEAGRVGAD PQPFQDGVYN
401: NSQHPRPPHR RHASELGAGA GAPREPLVSL APQRGQYRDP PYRRDPAAYR DINAGAAQRR QPDGAGARPY ESSDHVHPPY ARIVSALERS NEHIARHEEV
501: RRIGTGERVL QERVYGAGGA PGRAPLNQEQ GRLNSVRTRR

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.