Factsheet for Bra016733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21093	Canola	mitochondrion	52.61	99.49
AT1G13340.1	Thale cress	mitochondrion	42.84	78.24
Bra019826.1-P	Field mustard	mitochondrion	43.51	65.79
KRH45249	Soybean	mitochondrion	23.69	44.7
KRH75395	Soybean	mitochondrion	24.1	44.66
PGSC0003DMT400033769	Potato	mitochondrion	23.29	40.75
VIT_01s0011g03330.t01	Wine grape	mitochondrion	25.44	40.6
Solyc05g009550.2.1	Tomato	mitochondrion	23.16	40.52
TraesCS4B01G219300.1	Wheat	mitochondrion	9.91	40.22
TraesCS4D01G219500.2	Wheat	mitochondrion	9.64	39.13
EER92528	Sorghum	mitochondrion	9.37	37.63
HORVU4Hr1G062250.1	Barley	mitochondrion	9.24	37.5
TraesCS4A01G084900.2	Wheat	mitochondrion	8.97	37.02
Os03t0257500-01	Rice	mitochondrion	9.24	35.75
EER93588	Sorghum	mitochondrion	16.2	35.38
Zm00001d033714_P001	Maize	mitochondrion	16.6	35.33
Zm00001d034058_P004	Maize	mitochondrion	8.97	35.26
Os03t0710000-01	Rice	plasma membrane	16.73	35.21
TraesCS4B01G044800.1	Wheat	mitochondrion	15.66	34.82
TraesCS4D01G044800.1	Wheat	mitochondrion	15.93	34.39
TraesCS4D01G044400.1	Wheat	mitochondrion	15.93	33.81
TraesCS4B01G045100.1	Wheat	mitochondrion	15.93	33.71
TraesCS4A01G269300.1	Wheat	mitochondrion	15.93	33.62
Zm00001d028457_P001	Maize	mitochondrion	8.97	33.5
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	18.07	31.69
TraesCS4B01G219400.1	Wheat	mitochondrion	10.58	29.92
GSMUA_Achr6P24100_001	Banana	mitochondrion	19.41	29.65
Zm00001d047886_P001	Maize	mitochondrion	9.91	29.6
Zm00001d047887_P001	Maize	mitochondrion	9.77	29.32
Zm00001d034057_P001	Maize	mitochondrion	8.97	29.26
Zm00001d047885_P001	Maize	mitochondrion	9.77	29.2
OQU90964	Sorghum	mitochondrion	6.43	28.74
TraesCS4D01G219800.1	Wheat	mitochondrion	10.71	28.47
TraesCS4A01G084800.1	Wheat	mitochondrion	10.44	27.66
GSMUA_Achr10P...	Banana	mitochondrion	17.54	27.07
HORVU4Hr1G062260.2	Barley	plastid	10.17	26.67
Bra012478.1-P	Field mustard	mitochondrion	10.98	25.39
Zm00001d047884_P001	Maize	cytosol	4.82	25.17
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	5.35	23.12
Bra011633.1-P	Field mustard	mitochondrion, plastid	12.58	21.61
EER92527	Sorghum	mitochondrion, plastid	14.86	20.71
Zm00001d028456_P001	Maize	mitochondrion	14.46	20.34
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	14.32	20.0
Bra010522.1-P	Field mustard	plastid	11.24	19.95
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	14.46	19.93
Os03t0257600-01	Rice	mitochondrion	14.32	19.81
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	14.32	19.81
HORVU4Hr1G062110.1	Barley	mitochondrion	14.46	19.71
Bra021112.1-P	Field mustard	nucleus	6.29	19.67
Bra027239.1-P	Field mustard	plastid	6.56	19.37
Bra006177.1-P	Field mustard	mitochondrion	8.97	19.03
Bra013184.1-P	Field mustard	mitochondrion	5.62	17.36
Bra008502.1-P	Field mustard	nucleus	8.57	16.89
Bra018962.1-P	Field mustard	extracellular, vacuole	7.9	16.57
Bra036745.1-P	Field mustard	nucleus	12.05	15.9
Bra039012.1-P	Field mustard	mitochondrion	13.52	11.01
Bra030391.1-P	Field mustard	nucleus	7.1	10.6
Bra011109.1-P	Field mustard	mitochondrion	12.18	9.89
Bra011340.1-P	Field mustard	nucleus	0.54	4.26

Protein Annotations

Gene3D:1.20.1260.60	Gene3D:1.25.40.280	MapMan:35.2	InterPro:BRO1_dom	InterPro:BRO1_sf	EnsemblPlantsGene:Bra016733
EnsemblPlants:Bra016733.1	EnsemblPlants:Bra016733.1-P	ncoils:Coil	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:IPR004328	InterPro:IPR038499	InterPro:Ist1	UniProt:M4DJQ5	PFAM:PF03097	PFAM:PF03398
PFscan:PS51180	PANTHER:PTHR23030	PANTHER:PTHR23030:SF18	SMART:SM01041	UniParc:UPI0002545E67	SEG:seg

Description

AT1G13340 (E=9e-150) | unknown protein

Coordinates

chrA08:+:19722238..19727310

Molecular Weight (calculated)

84261.9 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.445

Length

747 amino acids

Sequence
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LLNLALTRLS ILKNQRQVRC SQATSDVTEL LKLGHHENAY HRVDQVIKDQ NTLDVLFFIH GYFTLLIDRV HLFEHNRDCP
101: DEILEAVSSL LFAASRIGEF PELQEIRNVL ISRFGKDMAA RSIELRSNCG VNPKIIQKLS TRHPPREVRM KVLMEIAAEN NIVLKLEEAS STSTERTSSE
201: VSKGKLTSED EEGYELSDSV KRGKKKYKDV ADAAQAAFES AAHAADAARA AVELSQFSPR GGGNSFSGSE NKKSEQERND DDFRGGEVDA RSESKRSMSD
301: SDEIIEDVPV MSFREDPVKL LEKDVVIYDS EEEIQYTTKP NTTTNVKEKQ QVMDLPNRAD TGHVDHMVHS VGDPFMRKVG LKGPVSVRTR QIVFEKVLSC
401: DGPTTLQEVK NLSSKRKAVE ESVNRSSNVT DAIAREMNRG ITSCEQDLLK LGEYLPLLFN LVHHADKIKH VSGLKIRWSS GLISQTLIQR KCPKFFQVDN
501: IMFELGMVLY FYALKLRERA MELVSTDVKK SITLYREASG VFHHLSHDLL PSLLPSLPQG KLPELTPWLC TSLSLLCLAE GQAVTTKNAE ESGRSASLLS
601: KLHYGTTQML SEASALLSSR ANGECKDLSS RFLEYVSTMR ALHELKSQKH LAEVLESEER VGEAVGVLRR ASAAARRSMP SKEDKWITIF KNEREEVSKK
701: MAKYEKLNDF LLERIPVETE LPFPKGETIV KLIPYIPTRW EQELRFK

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.